Gene Information

Name : LM5578_0339 (LM5578_0339)
Accession : YP_003412457.1
Strain : Listeria monocytogenes 08-5578
Genome accession: NC_013766
Putative virulence/resistance : Unknown
Product : SPOUT methyltransferase superfamily protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1576
EC number : -
Position : 346949 - 347428 bp
Length : 480 bp
Strand : +
Note : -

DNA sequence :
ATGAATATCCAAATTGTAACGGTCGGGAAATTAAAAGAAAAATATTTAGTACAAGGAATCGCTGAATATTTAAAACGACT
TAGCGCCTACGCGAAAGTGACGATTGTTGAAGTTCCGGATGAAAAAGCCCCAGAAGTGCTTAGTGATGCGGAAATGAAAC
AAGTGAAGGATAAAGAGGGTGCGCGGATTTTAGCAAAGATTCCGGACGATGCCCATGTGATTGCGCTGGCGATTGATGGG
GAAATGAAGTCGAGTGAAGAATTTGCGGCGGATTTGGATAAGCTGGCGACTTATGGTAAGAGTAAGGTGACGTTTGTGAT
TGGTGGATCACTGGGGCTTAGTGAGGCGGTGCTGAAGCGGAGTAATGAGCGGATTTCGTTTGGGAGGTTAACGTTGCCGC
ATCAGTTGATGAGATTGGTGCTGGTGGAGCAGGTTTACCGGGCGTTTCGAATTGTTCGGGGGGAGCCTTATCATAAATAG

Protein sequence :
MNIQIVTVGKLKEKYLVQGIAEYLKRLSAYAKVTIVEVPDEKAPEVLSDAEMKQVKDKEGARILAKIPDDAHVIALAIDG
EMKSSEEFAADLDKLATYGKSKVTFVIGGSLGLSEAVLKRSNERISFGRLTLPHQLMRLVLVEQVYRAFRIVRGEPYHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 7e-44 62
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 7e-44 62
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 7e-44 62
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 7e-44 62
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 1e-43 62
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 7e-44 62
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 1e-43 62
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 7e-44 62
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 4e-44 62
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 7e-44 62
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 7e-44 62
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 7e-44 62
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 7e-44 62
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 1e-43 61
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 2e-43 60
orfXhom BAB83497.1 open reading frame X Not tested SCC 12263 Protein 2e-39 60
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 1e-42 59
unnamed ACL99851.1 hypothetical protein Not tested Type-V SCCmec Protein 8e-28 59
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 1e-42 59