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Name : LM5578_0310 (LM5578_0310) Accession : YP_003412428.1 Strain : Listeria monocytogenes 08-5578 Genome accession: NC_013766 Putative virulence/resistance : Unknown Product : succinyl-diaminopimelate desuccinylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0624 EC number : - Position : 315735 - 316874 bp Length : 1140 bp Strand : + Note : - DNA sequence : ATGGACCAACAAAAAAAGATTCAAATTTTAAAGGACATGATAAATATTGATTCGACTAATGGGCATGAAGAACAAGTTGC GAACTATTTGCAAAAGTTGTTAGCTGAACACGGTATTGAGTCCGAAAAGGTACAATACGACGTAGACAGAGCCAGCCTAG TAAGCGAAATTGGTTCCAGTAACGAGAAGGTTTTGGCATTTTCAGGGCATATGGATGTAGTTGATGCGGGTGATGTATCT AAGTGGAAGTTCCCACCTTTTGAAGCGACAGAGCATGAAGGGAAACTATACGGACGCGGCGCAACGGATATGAAGTCAGG TCTAGCGGCGATGGTTATTGCAATGATTGAACTTCATGAAGAAAAACAAAAACTAAACGGCAAGATCAGATTATTAGCAA CAGTTGGGGAAGAAATCGGTGAACTTGGAGCAGAACAACTAACACAAAAAGGTTACGCAGATGATTTAGATGGTTTAATC ATCGGTGAACCGAGCGGACACAGAATCGTTTATGCGCATAAAGGTTCCATTAATTATACCGTTAAATCCACTGGTAAAAA TGCCCATAGTTCGATGCCAGAGTATGGTGTGAATGCAATTGATAATTTGATACTATTTTACAATGAAATAGAAAAATACG TTGCTTCCATCCATGCCACAAATGAAATACTTGGCGATTTTATTCATAATGTCACGGTGATTAATGGCGGAAATCAAGTC AATAGTATTCCGGAAAAAGCAGAACTACAAGGTAATATTCGTTCCATACCAGAAGTTGATAACGAGACTTTGAAGCGACG TATTGTTGAAATTGTGAATGAGTTAAATAAAAAAGAACATGTGAAGTTAGAGTTACTGTTCGATTATGATAAACAGCCTG TATTTAGCGATAGGAATTCAAGCTTAGTGAATGTCGCACGTGATGTTGCGAAAGGTATTATTAAAGAAGAGATACCCTTA CTTGGAATTTCTGGAACAACAGATGCAGCTGAATTTACCAAAGCGAAGAAACAATTCCCAGTGATTATTTTTGGACCAGG AAACGAAACCCCTCACCAAGTAAACGAAAATGTTTCAATTGACAATTATTTAGAAATGATTGATGTATACAAACGGATTG CCATTGAGTATTTATCGTGA Protein sequence : MDQQKKIQILKDMINIDSTNGHEEQVANYLQKLLAEHGIESEKVQYDVDRASLVSEIGSSNEKVLAFSGHMDVVDAGDVS KWKFPPFEATEHEGKLYGRGATDMKSGLAAMVIAMIELHEEKQKLNGKIRLLATVGEEIGELGAEQLTQKGYADDLDGLI IGEPSGHRIVYAHKGSINYTVKSTGKNAHSSMPEYGVNAIDNLILFYNEIEKYVASIHATNEILGDFIHNVTVINGGNQV NSIPEKAELQGNIRSIPEVDNETLKRRIVEIVNELNKKEHVKLELLFDYDKQPVFSDRNSSLVNVARDVAKGIIKEEIPL LGISGTTDAAEFTKAKKQFPVIIFGPGNETPHQVNENVSIDNYLEMIDVYKRIAIEYLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dapE | CAA07459.1 | succinyl-diaminopimelate desuccinylase | Not tested | Internalin | Protein | 2e-164 | 91 |
| unnamed | CAC20637.1 | - | Not tested | Internalin | Protein | 1e-162 | 90 |
