Gene Information

Name : LM5578_2998 (LM5578_2998)
Accession : YP_003415106.1
Strain : Listeria monocytogenes 08-5578
Genome accession: NC_013766
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3716
EC number : -
Position : 3004822 - 3005643 bp
Length : 822 bp
Strand : -
Note : -

DNA sequence :
ATGGCGAATACGAAGACTGAGCAGGATTTTGAGAAAGTCCTCAAGAGACGCGATTTAATAGCAGCAAACTTTCGTTGGTT
GTTTGCCAGCCAAATCTGTTGGAACTATGAGCGAATGATGTCGACTGGTTATCTTTATAGTATTTTGCCAACGCTTCGGA
AGCTTTATAAAACTGATGATGATTTAAAAGATATGATGAATATGCATAACCAATTCTTTAATACAAATCCTATGGTCGGT
GGTTTGATTTTAGGAATGGATATGGCGATTGAAGAGCGAGAAAAGAAAGCATCAAAAGAAGTCGTAACTGGTTTGAAGAC
TGGATTAATGGGACCGTTTGCTGGTGTTGGTGATACGATTTTCGGGGTTATTTTACCGACGATTTTTGGATCAATTGCCG
CATATATGGGACTTCAAGGTAATGTGACAGGTGTAGTTATCTGGGTATTAGTAAATATTTTGGTTGTGGGAGCTAGATTT
ACTTTACTTCCTCTAGGATATAAGCAAGGTGCGAAACTAGTGACGGAATTCGCGGATAGACTTAACGCGTTAACCGATGC
AGCTATTTTGCTCGGGGTCACGGTCGTCGGGGCATTAATACCAACCGTAATTAAAGCAACTGTCCCATTCGTTTATAAAT
CAGGAAAAGTAGAGCTCAAAATGCAAGACATGCTAGATCAAATCATGCCATCACTCGTTCCAGTCTTACTTGTGGCACTA
ATCTATGCACTTTTAGGCCACAAAAAAATGACATCTACGAAGGCTATTTTATTAGTAATGGTTATTGCGATTATTTTATT
CAACCTAAAAATTCTAGGTTAA

Protein sequence :
MANTKTEQDFEKVLKRRDLIAANFRWLFASQICWNYERMMSTGYLYSILPTLRKLYKTDDDLKDMMNMHNQFFNTNPMVG
GLILGMDMAIEEREKKASKEVVTGLKTGLMGPFAGVGDTIFGVILPTIFGSIAAYMGLQGNVTGVVIWVLVNILVVGARF
TLLPLGYKQGAKLVTEFADRLNALTDAAILLGVTVVGALIPTVIKATVPFVYKSGKVELKMQDMLDQIMPSLVPVLLVAL
IYALLGHKKMTSTKAILLVMVIAIILFNLKILG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0553 NP_814323.1 PTS system transporter subunit IID Not tested Not named Protein 3e-41 45
ef0079 AAM75283.1 EF0079 Not tested Not named Protein 2e-41 45