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Name : lysS (LM5578_2789) Accession : YP_003414897.1 Strain : Listeria monocytogenes 08-5578 Genome accession: NC_013766 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 2792089 - 2793585 bp Length : 1497 bp Strand : - Note : - DNA sequence : ATGAGTAACGAGAATCATGAAGAACTAAATGACCAACTCATCGTCCGTCGTGAAAAAGTGGACACATTGCGCGAAGAAGG CATAGATCCTTTTGGCGAAAAATTCATCCGTTCCATCAGCCCGGAAGAAATCGAAACAAAATTCGCTGATAAATCAAAAG AAGAACTTGAAGAAGCTGCTATTGAAGTTTCTGTAGCAGGTCGTATTATGACAAAGCGTGTAAAGGGTAAGGTAGGTTTC ACACATATTCAAGACCGTTTCCATCAATTACAAATCTATATCCGTAAAGATGCGATTGGCGAAGATGCTTACGCAGTCTT CAAATTAGCAGATCTAGGTGACATTATTGGTATAAAAGGAACTATTTTCCGTACTAATACAGGTGAACTTTCTGTTAAAG CAACGGAATTCACTTTGCTTTCCAAATCGTTACGCCCACTTCCTGATAAATATCATGGTTTAAAAGACGTAGAACAACGC TATCGTCAACGCTATTTAGACTTAATCACAAACGAAGAAAGTCAAAATCGCTTTGTGATGCGCAGTAAAATCTTGAAATA CACTCGTGATTATATGGATAACCAAGGATTCTTAGAAGTAGAAACTCCGGTGCTTCATACAATTGCTGGTGGTGCTGCTG CAAAACCATTTATCACGCACCATAATGCGCTTGATATGGAATTATACTTACGAATCGCTTTAGAACTACACTTAAAACGT CTAATCGTTGGTGGGATGGATAAAGTGTACGAAATTGGCCGTGTTTTCCGTAATGAAGGAACATCCACGCGTCATAACCC AGAATTTACAATGCTAGAATCCTATGCAGCATACGAAGATTATGAAGATGTTATGGATCTGGTAGAAGGTTTAGTATCCA CGGTATGTAAACAAGTAAATGGAACAACAGAAATAACATACGGTGAATACAAAGTAGATTTAACTCCTAACTGGCGCCGT ATCCACATGGCAGATGCTGTAAAAGAATACGTAGGAGTGGATTTTTGGAACGTAACTTCCGATGAAGAAGCGCGTGAACT AGCAAAAAAACATGATGTGCCAGTAACGGAACACATGACATACGGGCACATCCTTAATGAGTTTTTCGAAACATACGTAG AAGAAAAGCTCATTCAACCAACCTTTGTTTACGGGCATCCGGTGGAAATTTCCCCATTAGCGAAGAAAAACAAAGAAGAT GAACGTTTTACTGACCGTTTTGAATTATTTATCGTTGGTCGTGAACATGCAAATGCATTCTCAGAATTAAACGATCCAAT TGATCAAAGAGAACGCTTTGAAGCGCAAATGAAAGAACGTGAGCAAGGTAATGATGAAGCACACGGAATGGATGCAGATT TCCTTGAAGCTTTAGAATACGGTCTACCGCCAACTGGTGGACTTGGAATAGGTATTGATCGTCTAGTAATGCTATTAACA GATGCCCCGTCTATTCGTGATATCCTATTATTCCCAACTATGAAACACCGCGACTAA Protein sequence : MSNENHEELNDQLIVRREKVDTLREEGIDPFGEKFIRSISPEEIETKFADKSKEELEEAAIEVSVAGRIMTKRVKGKVGF THIQDRFHQLQIYIRKDAIGEDAYAVFKLADLGDIIGIKGTIFRTNTGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQR YRQRYLDLITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELYLRIALELHLKR LIVGGMDKVYEIGRVFRNEGTSTRHNPEFTMLESYAAYEDYEDVMDLVEGLVSTVCKQVNGTTEITYGEYKVDLTPNWRR IHMADAVKEYVGVDFWNVTSDEEARELAKKHDVPVTEHMTYGHILNEFFETYVEEKLIQPTFVYGHPVEISPLAKKNKED ERFTDRFELFIVGREHANAFSELNDPIDQRERFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLT DAPSIRDILLFPTMKHRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-105 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_003414897.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-105 | 48 |
