|
Name : kdpB (LM5578_0179) Accession : YP_003412298.1 Strain : Listeria monocytogenes 08-5578 Genome accession: NC_013766 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : - Position : 186329 - 188374 bp Length : 2046 bp Strand : + Note : - DNA sequence : ATGATGGAAAAAGGTATTTGGAAAGATGCGCTGATTCAGTCGACGAAAAAACTGTCTCCAAAACTGCAAGTGAAAAATCC GGTGATGTTGCTTGTTTATGTTGGTGCGATTTTGGCAACGAGCCTTTATTTTCTCGGTTTCTTCGGGATTTCGGATGAGA AGTCTGGTTATACGCTAGCAATTGCGCTGATTTTATGGTTTACAGTGTTGTTTGCGAATTTTGCAGAGGCGATTGCGGAA GGTCGTGGTCGAGCACAGGCGGATAGTTTGAAAATGGCTCGAAAAGACGTTTTAGCTCGAAAATTAAAGAATGTTGATGA TAAAACTGATGTGATTGAAGTTGCTTCGAATGACTTGAAAAAAGGCGATATTGTGTATGTCCTTGCGAATGAACAAATAC CGATGGATGGCGAGGTCATTGAAGGTGCGGCTTCGGTTGATGAAAGTGCGATAACTGGGGAATCTGCACCAGTAATTCGA GAGTCTGGCGGGGATAGAAGTGCCGTGACGGGTGGAACTACACTTGTTTCCGATTGGCTGGTTGTTCGTGTAACGGCGGT CTCTGGAGAAAGTTTCTTAGATAAAATGATTGCGATGGTGGAAGGAGCTTCACGGAAAAAGACGCCGAATGAGATTGCTT TACAAATTTTACTTGTAACGCTTTCGATTATTTTTCTGGCGGTTTCAGCCACACTTTTACCATTTACTGAATTTGCGAGT AAGCAGGCGGGTGCTGGATCGGCAATTTCGATTACGAATGTGATTGCTTTGCTCGTTTGTTTGGCGCCAACTACGATTGG TGCACTACTTTCGTCGATTGGAATTGCAGGGATGAGTCGGTTAAATCAAGCGAATGTTTTAGCGATGAGTGGTCGTGCGA TTGAGGCAGCTGGCGATGTGGATGTGCTTTTGCTCGATAAAACTGGGACGATTACACTGGGAAACCGGAAAGCAAGCGAA TTTTTGCCAGTGGATGGTGTGACGGAACAAGAGCTAGCAGATGCGGCGCAACTTTCTTCGATTGCGGATGAAACGGCGGA AGGTCGCAGTATTGTTGTGTTGGCGAAAGAACGCTTTGATATTCGTGGTCGAGATTTTGCTGAAATGCACGCAGAATTCG TTCCTTTCACGGCAACAACGCGAATGAGTGGAATTGATTATCAAGAAAATACGATTCGAAAAGGCGCGGCGGATGCGGTT CGTGCATATGTAACGGCGAATGGTGGGACGTACCCCAAAGAGTGTGATGCGATTGTGAGTAAAGTTGCTGGAGCTGGTGG TACACCGCTTGTCGTTGTTCGTAACAATCAAGTGCTGGGCGTCATTTATTTAAAAGATATCGTGAAGAATGGTGTAAAAG AACGTTTTCTCGATTTACGAAAAATGGGTATTAAAACAATTATGATTACTGGCGATAATCCAATGACCGCAGCAGCAATT GCGGCAGAAGCAGGAGTCGATGATTTTCTAGCAGAAGCAACCCCAGAAGCAAAATTGGAATTAATTCGTGAATATCAACG GGAAGGCCATTTAGTGGCGATGACAGGAGACGGAACGAATGATGCGCCAGCTCTTGCGCAAGCGGATGTGGCGGTTGCGA TGAATACAGGAACACAAGCTGCAAAAGAAGCTGGGAATATGGTTGATCTGGATTCTAGTCCTACTAAATTAATTGATATT GTTCGGATTGGCAAACAACTGCTAATGACACGTGGGGCACTGACGACTTTTAGTGTTGCTAACGACTTAGCAAAATACTT TGCGATTATTCCGGTGTTATTTTACGGTATTTTTCCACAGCTTGAAGCGCTTAATTTAATGGGATTAACAAGCCCGACGA GCGCCATTTTATCCGCGATTATTTACAATGCGGTGATTATCATTGTTCTTATTCCGCTTTCTTTAAAAGGTGTGAAATAT CGTGAAATGCCTGCTGGAAAATTACTGAGCCGAAATATGTTGATTTATGGTCTGGGGGGGTTGATTGCTCCATTTATCGC GATTAAATTGATTGATATGCTATTAACTGTTCTAGGAATCGTTTAA Protein sequence : MMEKGIWKDALIQSTKKLSPKLQVKNPVMLLVYVGAILATSLYFLGFFGISDEKSGYTLAIALILWFTVLFANFAEAIAE GRGRAQADSLKMARKDVLARKLKNVDDKTDVIEVASNDLKKGDIVYVLANEQIPMDGEVIEGAASVDESAITGESAPVIR ESGGDRSAVTGGTTLVSDWLVVRVTAVSGESFLDKMIAMVEGASRKKTPNEIALQILLVTLSIIFLAVSATLLPFTEFAS KQAGAGSAISITNVIALLVCLAPTTIGALLSSIGIAGMSRLNQANVLAMSGRAIEAAGDVDVLLLDKTGTITLGNRKASE FLPVDGVTEQELADAAQLSSIADETAEGRSIVVLAKERFDIRGRDFAEMHAEFVPFTATTRMSGIDYQENTIRKGAADAV RAYVTANGGTYPKECDAIVSKVAGAGGTPLVVVRNNQVLGVIYLKDIVKNGVKERFLDLRKMGIKTIMITGDNPMTAAAI AAEAGVDDFLAEATPEAKLELIREYQREGHLVAMTGDGTNDAPALAQADVAVAMNTGTQAAKEAGNMVDLDSSPTKLIDI VRIGKQLLMTRGALTTFSVANDLAKYFAIIPVLFYGIFPQLEALNLMGLTSPTSAILSAIIYNAVIIIVLIPLSLKGVKY REMPAGKLLSRNMLIYGLGGLIAPFIAIKLIDMLLTVLGIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 0.0 | 73 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 0.0 | 73 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-145 | 56 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 3e-145 | 56 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 4e-145 | 56 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-145 | 56 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-145 | 56 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-145 | 56 |
