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Name : polA (LM5578_1711) Accession : YP_003413821.1 Strain : Listeria monocytogenes 08-5578 Genome accession: NC_013766 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : - Position : 1672079 - 1674706 bp Length : 2628 bp Strand : - Note : - DNA sequence : GTGAATAAATTAGTATTAATTGATGGAAATAGTATTGCGAATCGCGCTTTTTATGCGTTACCACTTTTAAATAACGATAA AGGTGTTTACACAAATGCGGTGTATGGATTCGCAATGATGTTGATGAATGTACTCGAAAAAGAAAAACCCAGCCATGTGC TCGTTGCATTTGATGCTGGAAAAACAACTTTTAGACATACAACATTTAAAGGTTATAAAGGCGGACGTCAAAAAACCCCA AGTGAGTTATCTGAACAGTTTCCATTCATCCGAGAGCTTTTAACGGCGTATGATATCCCGCAATATGAACTGGCCAATTA CGAGGCAGACGATATTATCGGAACATTGACGAAAAAAGCGGAAGCAGATGGAATGGAAGTTGCAATTATTACCGGAGACC GCGATTTAACACAATTAGCTTCTGAAAAAACAACGGTTTATATTACTAAAAAAGGCATAGCCGATATGGAAACCAACACA CCAGAAACACTAAAAGAAAAATACAATCTAACTCCTGAACAAATCATTGATATGAAAGGTTTAATGGGAGATTCCTCCGA TAATATTCCTGGGATTCCAGGCGTTGGTGAAAAAACAGCCTTAAAACTCTTACATGAATTTGGCGGAACGGTGGAAAGTG TGTTAGAGCACGCCGAGGAAATTTCCGGTAAAAAACTAAAAGAAAAAGTACTAGAAAATAAAGAATTAGCTATTTTAAGT AAAGAGCTAGCTACAATCAATGTGGATTCACCGATTGAATGCACAGTCGAAAGCACGAAATATGACGGGTATCAAACTGA AAAAGTTATCCCTTTATTAAAAGAAATGAATTTTACAACACTTTTGAAAAATATCGAAGGAGATACACCGGAGGAATCGA AAGAACTAAAAGAATTGTCTTTTGAAATAGTAACGGAATTAAAAGAACAACATTTTGGTGGGAAAACCGCACTTTATGTG GAGCTAGAAAATGATAATTACCATACAGCAAACTTCATCGGGCTGACAGTACATTCCAGCCAAGGAACGTATTTCTTTAC AAAAGAAACAGCTGAAAGTAGTGAGGCATTCCGCAAATGGGTAGAAAGTGATCAAACAAAAGTAGTGTATGATGCGAAGA AAACAATAGTTGCAATGAACCGCATTGGTTTGGCAATTTCTGGTATCACATTTGATATCATGTTAGCATCTTACTTGTTA AATCCATCTGATTCAATTGATGATTTTACAAGTGTTGCAGTAAGACATGATTACACAGAAGTAGAAACAGATGAAGCAGT CTACGGAAAAGGTGCTAAACGTAGCACTCCTGAAGAAAGCATTGTTGCGGCACACTTAGCTAGGAAAGCAGTGGCCATTG CTGACTTAGAGAAAAGACTAGTTGATGATTTAGAGAAAAATGAACAACTAGCTTTGATGGAAGACCTAGAGCTACCACTA ACATTTGTTTTAGCAGAAATGGAGATGCAAGGAGTCAGCGTAGATACAGATCGGCTTGAAGATATGAAAGTAGAGCTGGG TGGAAGACTAAAAACATTAGAAGCATCCATTCATTCACTAGCTGGCGAAGAATTCAATATTAATTCACCGAAACAACTAG GTGTAATTTTATTTGAAAAGCTGGAACTTCCCCCAGTCAAGAAAACAAAAACAGGCTATTCAACAGCTGCGGATGTACTG GAAAGTTTGTCTGGAAAACACGCGATTATTGATGAAATTTTGTTATATCGTCAACTTGGTAAAATTCAGTCCACTTATAT CGAAGGGCTGCTTAAAGTGACGGATAAAGAAACACATAAGGTCCATACACGTTTCAACCAAACATTAACGCAAACGGGAC GTTTAAGTTCAGTCGATCCGAACTTACAAAATATCCCGATTCGTTTAGAAGAAGGTCGGAAAATCAGACAAGTTTTTGTG CCGAGTAAACCTGGTTGGAAAATGTTTTCAGCCGATTATTCTCAAGTAGAGTTGCGAGTTTTAGCACATATTTCTGAAGA TGAGAATTTAATTTATGCATTTAAGCACGATTACGATATCCATACGAAAACAGCCATGGACGTGTTTCATGTGGAGAAGG AAGAAGTGGATTCACTAATGCGCCGTCAAGCTAAAGCAGTAAACTTTGGTATTGTATATGGTATTAGTGATTATGGGCTT TCGCAAAACCTTGGTATTACGCGTAAAGAAGCAAAAGACTTTATTGATCGTTACTTTGTGAGTTATCCAGCCGTGAAAGA ATATATGCAAGACATTGTCCGTTTTGCGAAAGAAAAAGGCTATGTAGAGACCATTTTACATCGTCGTCGTTATATTCCGG AGATTGTTAGTCGTAATTTTAATGTTCGCGGATTTGCAGAAAGAACTGCGATGAACACACCTATTCAAGGTAGTGCCGCT GATATTATCAAAAAAGCGATGATTCTGATGAGCGAGCGTTTAGTATCTGAAAAATTAGAAGCAAAATTATTACTTCAAGT GCACGATGAATTAATCTTCGAAGCACCTGAAGCTGAAATAGCTAAATTAGAAGAAATTGTCCCAGATGTTATGGAAAATG CAGTAGAGCTTTCTGTGCCGCTTAAAGTAGATAGCGCCTTTGGTGACACTTGGTACGACGCGAAATAA Protein sequence : MNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNVLEKEKPSHVLVAFDAGKTTFRHTTFKGYKGGRQKTP SELSEQFPFIRELLTAYDIPQYELANYEADDIIGTLTKKAEADGMEVAIITGDRDLTQLASEKTTVYITKKGIADMETNT PETLKEKYNLTPEQIIDMKGLMGDSSDNIPGIPGVGEKTALKLLHEFGGTVESVLEHAEEISGKKLKEKVLENKELAILS KELATINVDSPIECTVESTKYDGYQTEKVIPLLKEMNFTTLLKNIEGDTPEESKELKELSFEIVTELKEQHFGGKTALYV ELENDNYHTANFIGLTVHSSQGTYFFTKETAESSEAFRKWVESDQTKVVYDAKKTIVAMNRIGLAISGITFDIMLASYLL NPSDSIDDFTSVAVRHDYTEVETDEAVYGKGAKRSTPEESIVAAHLARKAVAIADLEKRLVDDLEKNEQLALMEDLELPL TFVLAEMEMQGVSVDTDRLEDMKVELGGRLKTLEASIHSLAGEEFNINSPKQLGVILFEKLELPPVKKTKTGYSTAADVL ESLSGKHAIIDEILLYRQLGKIQSTYIEGLLKVTDKETHKVHTRFNQTLTQTGRLSSVDPNLQNIPIRLEEGRKIRQVFV PSKPGWKMFSADYSQVELRVLAHISEDENLIYAFKHDYDIHTKTAMDVFHVEKEEVDSLMRRQAKAVNFGIVYGISDYGL SQNLGITRKEAKDFIDRYFVSYPAVKEYMQDIVRFAKEKGYVETILHRRRYIPEIVSRNFNVRGFAERTAMNTPIQGSAA DIIKKAMILMSERLVSEKLEAKLLLQVHDELIFEAPEAEIAKLEEIVPDVMENAVELSVPLKVDSAFGDTWYDAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 0.0 | 50 |
