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Name : LM5578_1574 (LM5578_1574) Accession : YP_003413684.1 Strain : Listeria monocytogenes 08-5578 Genome accession: NC_013766 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : - Position : 1533201 - 1534541 bp Length : 1341 bp Strand : - Note : - DNA sequence : GTGGCAAAATTTACATATGATGTCGTTATAATCGGAAGCGGTGCAAGTGGTACAACGGTTGCATTTGAAGCACAGGCAGC AGGGTTAAAAGTAGCAATTGTAGAAGAGCGGAATTGGGGTGGAACGTGTGTACTCAGAGGATGCGACCCTAAAAAAGTTC TCATCGGAGCAAGAGAAGCAAGAAATCTGTCCACCAGACTACGCGGCAAAGGCATTAAGCAAGCAGCGACGATTAGCTGG ACAGATTTAATGGCATTTAAAGAAACTTTTGTCGAGAATGTGCCAGAAAGTCGTTTGGCAAGCTTTCAAGAAGCTGGGAT TGAGACATTTTTTGGGGCAGCTAGTTTCCAAGATTCCCATTCCTTGCAAGTCGGCGATGATTTAATTTATGCTGAAAAAA TTGTCATCGCAACAGGAGCAACACCAAGCACGTTAAAAGTAGAAGGGAAAGAATACATTCAAACTAGCGATGATTTCTTA TCACTTGAAAAACTCCCAGATTCTGTCGTTTTTATTGGTGGAGGTTATATTTCATTTGAATTTGCTTCTATAGCACTCGC AGCTGGGAGAGATGTACACATTATTCACCATAATAGTGAACCTTTAAAGAAATTTGATCCTGATTTCGTAGCGGCATTAG TTGCCAATATAAAAGATGAAGGCATTCATTTCCATTTTGACACAGATATTACTAAAATTGAAAATGATGGTGGGAAATTG CATATTAAAGGTAAAGATAGCTTTTCATTACAAACAGATTTAATTATTGGAGCAACTGGTAGAATGCCAAACATCGCACA TCTATCTTTAGAAAATGCAAGCATCGATTACACTAAAAAAGGCATTGTCGTTAACGAAAAACTTCAAACACCTAACAACC CTCATATTTATGCATGCGGTGATGTCGCTGCGACAAAAGGTGCACCACTAACACCAGTTGTAAGCTTGGAAGCAGCACTT GTGGCTAAAAATGTTATAGGCGGAAACGAAAAAATAACTTATCCAGCGATACCAAGCGTCGTTTTCACTAGCCCAAAACT TGCAAGCATTGGTATAAGTACAGAAGAAGCTAAAGCAAATCCGGAAAAATACCAAATTAAAAATCATGACACAACTAGTT GGTACACATACAAACGAACAAATGAACAAATTGCGCTTGCAAAAATCATTGAAGATAGAGAGTCAGGGCAAATCAAAGGC GCTCATTTTCTTAGTGAAGAAGCAGATTATATGATAAATTACATTGCCATCTTAATGAAAGCAAATCTAACTTTAGCTGA TTTACAATCTGTTATTTTTGCCTACCCATCTCCAGCAAGTGACTTAACTGCTTTGAACTAG Protein sequence : MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERNWGGTCVLRGCDPKKVLIGAREARNLSTRLRGKGIKQAATISW TDLMAFKETFVENVPESRLASFQEAGIETFFGAASFQDSHSLQVGDDLIYAEKIVIATGATPSTLKVEGKEYIQTSDDFL SLEKLPDSVVFIGGGYISFEFASIALAAGRDVHIIHHNSEPLKKFDPDFVAALVANIKDEGIHFHFDTDITKIENDGGKL HIKGKDSFSLQTDLIIGATGRMPNIAHLSLENASIDYTKKGIVVNEKLQTPNNPHIYACGDVAATKGAPLTPVVSLEAAL VAKNVIGGNEKITYPAIPSVVFTSPKLASIGISTEEAKANPEKYQIKNHDTTSWYTYKRTNEQIALAKIIEDRESGQIKG AHFLSEEADYMINYIAILMKANLTLADLQSVIFAYPSPASDLTALN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| merR | BAB47647.1 | regulatory protein | Not tested | Type-III SCCmec | Protein | 5e-92 | 44 |
| SE0080 | NP_763635.1 | regulatory protein | Not tested | SCCpbp4 | Protein | 6e-92 | 44 |
