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Name : LM5578_1438 (LM5578_1438) Accession : YP_003413550.1 Strain : Listeria monocytogenes 08-5578 Genome accession: NC_013766 Putative virulence/resistance : Resistance Product : hypothetical protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1055 EC number : - Position : 1397342 - 1398637 bp Length : 1296 bp Strand : + Note : - DNA sequence : ATGCAGATTACTTTAGCTATTTTAGTATTTGTCCTAACGCTGTTTTTCGTAATTTGGCAGCCAAGAAAATTATCGATTGG ATGGTCAGCTTGCGGCGGAGCGTTAATCGCATTATTACTTGGTGTTGTCACCTTAGCTGATGTTATGACAGTTACAGGGA TTGTATGGAATGCGACACTTGCTTTTATTGCGATTATAATCATTTCACTCATTTTAGATGAAATTGGATTTTTTGAGTGG GCGGCCCTACATATGGCACGTTTAGCAAGAGGGAATGGATTATTAATGTTTATTCTTATTTCTATTTTGGGTGCTCTTGT CGCGGCACTGTTTGCTAATGACGGAGCGGCATTGATTCTGACGCCAATTGTTTTAGCAATGGTGCGAGCGCTGGGTTTTG ATGAGAAAAAGGTGTTTCCATTTATTATAGCTAGTGGATTTATAGCGGATACAACATCCTTGCCACTTGTAGTTAGTAAT TTAGTTAATATTGTTTCAGCTGATTTTTTTGGCATTAGTTTTTCACGGTATGCACTCATTATGTGGATCCCTACTATTTT TTCATTAGTTGCAAGTATTATCATTTTATATATCTATTTCCGAAAAGCTTTACCGAGAAAATACGATGTAAATGCGATTC AAAAGCCAGCTTCAGCACTTAAAGATAGGAAGATGTTTCATATTTCTTGGGGAATCCTTACTATTCTTGTAGTAGGCTAT TTTTTAAGTAGTTTTTTAGATATACCAGTGTCGTTTATTGCTTTACTAGTCGCTCTAATTTTCTTGTTAGTTGGTGCAAA AAGCCACTCTGTTTCAACAAAAGCTATTCTAAAAGGAGCACCTTGGAGCATTGTTTTTTTCTCAGTTGGTATGTATGTGG TTGTGTATGGCTTGCAAAATGTTGGAATCACCAAACTATTATCAGAAGCTATTACCTATGTCGCGCACTTTGGTTTATTT GCCGGAACAATCGGAATGGGTTTCATTGCTGCGATACTATCGTCTGTCATGAATAATTTGCCTACCGTGATGATAAATGC GCTAGCAATCGATCATACTTCATTTACCGGAGTAATGAAAGAGGCGCTAGTATATGCAAATGTTATTGGTTCGGATCTAG GACCTAAAATAACACCCATTGGCTCGCTCGCAACTTTACTTTGGTTACATGTGTTAGCTCAGAAAGGCATAAAGATAAGT TGGGCGTCATACTTCAAAATTGGTATTGTCATTACTATTCCTGTTTTGTTCATTACGCTCGTAGGCTTATACGTATCATT ACTTATTTGGAACTAA Protein sequence : MQITLAILVFVLTLFFVIWQPRKLSIGWSACGGALIALLLGVVTLADVMTVTGIVWNATLAFIAIIIISLILDEIGFFEW AALHMARLARGNGLLMFILISILGALVAALFANDGAALILTPIVLAMVRALGFDEKKVFPFIIASGFIADTTSLPLVVSN LVNIVSADFFGISFSRYALIMWIPTIFSLVASIIILYIYFRKALPRKYDVNAIQKPASALKDRKMFHISWGILTILVVGY FLSSFLDIPVSFIALLVALIFLLVGAKSHSVSTKAILKGAPWSIVFFSVGMYVVVYGLQNVGITKLLSEAITYVAHFGLF AGTIGMGFIAAILSSVMNNLPTVMINALAIDHTSFTGVMKEALVYANVIGSDLGPKITPIGSLATLLWLHVLAQKGIKIS WASYFKIGIVITIPVLFITLVGLYVSLLIWN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 2e-122 | 67 |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 8e-117 | 65 |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 2e-116 | 64 |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 2e-95 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LM5578_1438 | YP_003413550.1 | hypothetical protein | BAC0574 | Protein | 4e-119 | 66 |
| LM5578_1438 | YP_003413550.1 | hypothetical protein | BAC0575 | Protein | 3e-118 | 65 |
| LM5578_1438 | YP_003413550.1 | hypothetical protein | BAC0578 | Protein | 3e-95 | 58 |
| LM5578_1438 | YP_003413550.1 | hypothetical protein | BAC0577 | Protein | 7e-97 | 58 |
| LM5578_1438 | YP_003413550.1 | hypothetical protein | BAC0576 | Protein | 2e-95 | 58 |
| LM5578_1438 | YP_003413550.1 | hypothetical protein | BAC0031 | Protein | 1e-92 | 57 |
