|
Name : LM5578_1392 (LM5578_1392) Accession : YP_003413504.1 Strain : Listeria monocytogenes 08-5578 Genome accession: NC_013766 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 1347093 - 1348739 bp Length : 1647 bp Strand : - Note : - DNA sequence : ATGACAAAGTTTGCTCAAAAAACAATTTATCAAGTGTATCCGAAATCCTTTTATGATACGACTGGCGATGGTACTGGGGA TATTCCCGGTATCACTGCTAAGCTTGATTATTTACAAGAACTCGGAATTGAGATGATTTGGCTCAATCCATTTTATCCTT CCCCGCAAAATGATAATGGCTATGATATCGCTGACTATACAGCAGTTGATCCTTTATTTGGCACGATGGATGATGTTACT ACCCTTATTAAAGAAGCGAAAAAAAGAAATATTGGTATTATGATTGACTTAGTATTAAATCATACTTCAACAGAGCATCC TTGGTTTAAAAAAGCTCTTGCTGGCGATACTTTCTATCGTGATTTTTACTATTTTCGCCAAGCAAAAGTAGATGGTTCAC CACCAACAAACTGGGTTTCCAAATTCGGTGGTAACGCTTGGGAAAAATTACCTGGCTCCTCTGAATATTATTTGCATTTA TACGATGTTACCCAAGCTGATTTAGATTGGGCCAATCCAAATGTGCGAGAGGCACTCTTTGATGTCGTGAATTTTTGGAT TGACAAAGGTGTGGAAGGTTTTCGTTTAGATGTATTAAATGTGATTGCCAAACCTAAGTTTTTGGAAGATGATTTTGAAG GCGACGGTCGCCGTTTTTATACAGATGGACCGGGAATTCACGCTTATTTAAAAGAACTACATGAACGAACTTTTGGCGAC AAGGCCATTATAACTGTTGGAGAAATGTCATCTACAGATATTGATAACTGCATTCGTTATAGTAACCCAGACGAAAAAGA ATTGTCCATGGTATTTCATTTCCATCATTTAAAAGTTGATTATCCTGATGGAGAAAAATGGCGTTTAGCAGATGTAAATT TCGAGAACTTGAAATCTATTTTCCATACGTGGCAAGTTGCGATGTCAGAAGAAAATGGATGGGATGCGCTTTTCTGGAAT AACCATGACCAACCTCGAGCACTTGGTCGCTTTGCTTCCGACAAGCCGGAACATTATTATCATTCTGCTACCCTACTTGG CGCAACTATTCATTTTATGCGCGGAACACCTTTTGTTTATATGGGGGAAGAAATCGGTATGATGAATCCAAAATTCCCTA CAATTGATGATTATGTGGATGTGGAAACGCTCAACCATTTTGATATTTTACAAAAAAACGGACTTAGTGAGCAGGAAGTA ATGGAGATTATTAAAGAACGTTCGCGCGATAACAGCCGAACTCCTATGCAATGGGACGATTCGCAAAATGCTGGTTTTAC GACTGGGACTCCTTGGCTAAAAGTGGCTGATAATGCAAAGGAAATAAATGTTCAAACTGCTTTATCTAATAAAACGAGCA TTTTCTATTTTTACCAAAAACTAATCGCACTCCGGAAAGAGCATCCTGTCATTCAAACGGGTGATTACACACCATATTTG ACGGAAGAAGATTCTATTATCGCCTACAAGCGTTCAAACGAAACTACTTCCCTTCTATCCATTCATCATTTTGGTTCAGA GAAGAAAAAAATTCAACTGCCAACTGAGTTTTTAAATGCTGAAGTACTTCTTTCTAATTATGAGCGCCAGAGAATCAGTT CTGAACTGGAATTAGCGCCATATGAAACATTAACATTAATACAATAA Protein sequence : MTKFAQKTIYQVYPKSFYDTTGDGTGDIPGITAKLDYLQELGIEMIWLNPFYPSPQNDNGYDIADYTAVDPLFGTMDDVT TLIKEAKKRNIGIMIDLVLNHTSTEHPWFKKALAGDTFYRDFYYFRQAKVDGSPPTNWVSKFGGNAWEKLPGSSEYYLHL YDVTQADLDWANPNVREALFDVVNFWIDKGVEGFRLDVLNVIAKPKFLEDDFEGDGRRFYTDGPGIHAYLKELHERTFGD KAIITVGEMSSTDIDNCIRYSNPDEKELSMVFHFHHLKVDYPDGEKWRLADVNFENLKSIFHTWQVAMSEENGWDALFWN NHDQPRALGRFASDKPEHYYHSATLLGATIHFMRGTPFVYMGEEIGMMNPKFPTIDDYVDVETLNHFDILQKNGLSEQEV MEIIKERSRDNSRTPMQWDDSQNAGFTTGTPWLKVADNAKEINVQTALSNKTSIFYFYQKLIALRKEHPVIQTGDYTPYL TEEDSIIAYKRSNETTSLLSIHHFGSEKKKIQLPTEFLNAEVLLSNYERQRISSELELAPYETLTLIQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 3e-108 | 42 |
