Gene Information

Name : LM5578_1354 (LM5578_1354)
Accession : YP_003413466.1
Strain : Listeria monocytogenes 08-5578
Genome accession: NC_013766
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0740
EC number : -
Position : 1317176 - 1317892 bp
Length : 717 bp
Strand : +
Note : -

DNA sequence :
ATGAAGTTGGAGATTAAAGGAACGATTATTTCAAATAATCAAAAATGGATTTATGACATGCTTGATATGGAAAGTACTAG
CCCAAGAGACATCGTTTTACCAGAAAACAATGAATCGATTGATGTGATTATCAATTCTGGCGGTGGTGATGTATATGCTG
GTAGTGAAATTTATACTACATTGAAAGGATATAACGGAACTGTAAATGTGAAAGTTGTAGGTATAGCTGCTAGTGCGGCT
TCGGTCATTGCGATGGCAGGAGATAAAGTGGAAATTAGTCCCACAGCCCAAATTATGGTGCATAATGTCGCTTCCGGAGT
ATTTGGTGATTATCGAGATCTTGAACATGAAGCAAAGGTTTCAAAAGGTTTCAATGTATCTGTGGCAAATGCTTACATGG
ACAAGACTGGAAAGAACATGGACGAACTATTAAACCTTATGGGCGAAACTACTTGGTTTAACGCACAACAAGCAGTAGAA
GCTGGCTTTGCTGATGAAGTAATGTTTTCTAATGAAAAAGCACCGCAGTTAGTTGCCAGTCTCTCGCCGGTAATCCCACA
GGATGCAATTGAAAAAATCATAAATAATATAAAACCGCCGCAGTTAGATATCGATGCAATTGTAGGAAAAGTAATAAATA
AGTTAGAACAATCAAATGATAAAGAAGAGAAGCCGAAAAAAGAAAATATACATCCTTTCAAACGGTTTCTTTTTTAA

Protein sequence :
MKLEIKGTIISNNQKWIYDMLDMESTSPRDIVLPENNESIDVIINSGGGDVYAGSEIYTTLKGYNGTVNVKVVGIAASAA
SVIAMAGDKVEISPTAQIMVHNVASGVFGDYRDLEHEAKVSKGFNVSVANAYMDKTGKNMDELLNLMGETTWFNAQQAVE
AGFADEVMFSNEKAPQLVASLSPVIPQDAIEKIINNIKPPQLDIDAIVGKVINKLEQSNDKEEKPKKENIHPFKRFLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAV1964 NP_372488.1 phiN315 scaffolding protein-like protein Not tested ¥ÕSa3 Protein 6e-41 46
SA1775 NP_375073.1 hypothetical protein Not tested ¥ÕSa3 Protein 6e-41 46
SAUSA300_1939 YP_494590.1 phi77 ORF015-like protein protease Not tested ¥ÕSa3 Protein 6e-41 46
SAUSA300_1939 YP_494590.1 phi77 ORF015-like protein protease Not tested ¥ÕSa3 Protein 6e-41 46
SAOV_1103 YP_005736598.1 Prophage Clp protease-like protein Not tested ¥ÕSa2 Protein 7e-41 46
SAKOR_01943 YP_008492131.1 ATP-dependent endopeptidase clp proteolytic subunit clpP Not tested ¥ÕSa3 Protein 5e-41 46
SEQ_0824 YP_002746160.1 phage ClpP protease Not tested ¥ÕSeq2 Protein 7e-21 44