Gene Information

Name : LM5578_1161 (LM5578_1161)
Accession : YP_003413275.1
Strain : Listeria monocytogenes 08-5578
Genome accession: NC_013766
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1210
EC number : -
Position : 1145683 - 1146555 bp
Length : 873 bp
Strand : -
Note : -

DNA sequence :
ATGAAAGTTAAAAAAGCAGTCATCCCGGCAGCAGGACTTGGTACAAGATTTCTTCCTGCAACAAAAGCGATGCCAAAAGA
AATACTTCCAATTGTAGACAAACCAACGATTCAATTTATCGTTGAAGAAGCAGTTGCGTCTGGAATTGAAGATATTTTAA
TTGTTACAGGGAAAGGAAAAAGAGCCATAGAAGACCATTTCGACTCTGTACCTGAACTTGAAAATAATTTACGTGAAAAA
AACAAATTAGATTTATTACATTTAGTGGAAGAAACCACTAATATTAACTTACATTTTATTCGTCAGTCGAAACCTAAGGG
ACTTGGAGACGCAATTTTACAAGCTAAAGGTTTCATTGGTAACGAACCATTTGTAGTAATGCTTGGGGATGACATCGTTC
AATCTAAAACCCCTTGTGCTAAACAATTAATCGATCAATACGAAAAGACTCATAGTTCTGTTATCGGTGTACAAAATGTT
CCTCGCGAAGAAACATATCGTTACGGCATTATTGATCCTGACAAAGAAGTAAGTGATCGTTTGTATAATGTAACTGGTTT
TGTGGAAAAGCCTAATGTAGAAGATGCTCCTTCCAACTTAGCGATTTTAGGAAGATATTTATTAACTCCAGAAATTTTTA
AGTATCTAGAAACACAAGAAGCTGGTTCTGGTGGAGAAATTCAATTAACTGATGCAATTAACCGTTTAAATGAAATTCAA
CCTGTTTTCGCCTATGATTTTGAAGGAGAACGTTTTGATGTTGGTGATAAATTCGGCTTTATTGAAACTACTTTAAAATT
TGCGCTAAAACATCCCGAAATTAAAGACGATGTCCGCGACCTAATTATCCGTCTCGGCGATGAACTTAAATAA

Protein sequence :
MKVKKAVIPAAGLGTRFLPATKAMPKEILPIVDKPTIQFIVEEAVASGIEDILIVTGKGKRAIEDHFDSVPELENNLREK
NKLDLLHLVEETTNINLHFIRQSKPKGLGDAILQAKGFIGNEPFVVMLGDDIVQSKTPCAKQLIDQYEKTHSSVIGVQNV
PREETYRYGIIDPDKEVSDRLYNVTGFVEKPNVEDAPSNLAILGRYLLTPEIFKYLETQEAGSGGEIQLTDAINRLNEIQ
PVFAYDFEGERFDVGDKFGFIETTLKFALKHPEIKDDVRDLIIRLGDELK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0059 YP_300149.1 UTP-glucose-1-phosphate uridylyltransferase Not tested SCC15305cap Protein 4e-85 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LM5578_1161 YP_003413275.1 hypothetical protein VFG0964 Protein 6e-94 65