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Name : serS (LM5578_0112) Accession : YP_003412232.1 Strain : Listeria monocytogenes 08-5578 Genome accession: NC_013766 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 118708 - 120018 bp Length : 1311 bp Strand : + Note : - DNA sequence : ATGGAAAAAAATAAAGGAGGAGTTAGCATGTTAGATGTAAAATTGTTACGTAATAATTTTGATGAAGTAAAGCAGAAATT ACAAAATCGCGGGGAAGACTTGGGTGAATTCGAGAAATTTGGCGAGTTAGATAAACGCCGCCGTACGCTGATTGTGGAGA CAGAAGCGCTGAAAAGTCAGCGCAATGAGGTGTCTCAAGAAATCGCTAAACTAAAACGCGAAAAACAAGACGCGGATGCT AAAATTGAAGAAATGCGTGTTGTTGGTGATCGTATTAAAACATTAGATATCGAACTACGCGAAATTGACGAGAAGTTAGA TATGATTTTAATGTCGATTCCAAATATTCCACACGAATCTACTCCGGTTGGCGAATCGGAAGACGATAACGTGGAAATCC GCAAATGGGGCGAAGTACGCGCATTTGATTTTGAACCAAAAGCGCATTGGGATTTAGGAACAGACTTAGATATCCTTGAT TTTGAAAATGCTGCGAAAGTAACTGGTAGCCGTTTTGTCTTTTATAAAAAATTAGGAGCAAGACTGGAACGAGCGCTTAT TAACTTTATGATGGACTTGCATTCGAATGAACATGGCTACGAAGAAATGTTACCGCCTTACATGGTAAACCGTGCGAGCA TGACAGGAACTGGTCAATTGCCGAAATTTGAAGAAGATGCTTTCTTAATTGAAGCAGAAGATTATTTCCTTATTCCAACA GCGGAAGTACCAGTAACAAACTACCACCGCGAAGACATTTTAAAAGCAGAAGACTTACCAAGAAAATATACAGCGTTTAG CGCATGTTTCCGCTCTGAAGCGGGATCTGCTGGTCGCGATACGCGTGGTTTAATCCGTCAACATCAATTTAACAAAGTGG AATTAGTTCAATTTGTGAAACCGGAAGATTCTTACGTGGCGCTAGAAAAATTAACTGGTAACGCAGAAGAAGTATTGCGT CGCTTAGAATTGCCATACCGCGTACTAAGCATGTGTACGGCTGATTTAGGCTTCACTGCTGCTAAAAAATATGATTTAGA AGTTTGGATTCCAAGCTACAATTCTTATCGTGAGATTTCTTCTTGCAGTAATTTTGAAAGCTTCCAAGCAAGACGCGCTA ACATTCGTTTCCGTCGTGAGCCAGGAAGCAAACCAGAATACGTGCATACACTAAATGGTTCTGGCTTAGCGCTAGGACGT ACAGTGGCTGCCATTTTAGAAAATTACCAAGATGCAGATGGTTCTGTACGCATTCCAAAAGTATTGCAAGGTTACATGGG CGGTATCGAGAAAATAGAATTACCAAAATAA Protein sequence : MEKNKGGVSMLDVKLLRNNFDEVKQKLQNRGEDLGEFEKFGELDKRRRTLIVETEALKSQRNEVSQEIAKLKREKQDADA KIEEMRVVGDRIKTLDIELREIDEKLDMILMSIPNIPHESTPVGESEDDNVEIRKWGEVRAFDFEPKAHWDLGTDLDILD FENAAKVTGSRFVFYKKLGARLERALINFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDAFLIEAEDYFLIPT AEVPVTNYHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVQFVKPEDSYVALEKLTGNAEEVLR RLELPYRVLSMCTADLGFTAAKKYDLEVWIPSYNSYREISSCSNFESFQARRANIRFRREPGSKPEYVHTLNGSGLALGR TVAAILENYQDADGSVRIPKVLQGYMGGIEKIELPK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-130 | 62 |
