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Name : LM5578_1004 (LM5578_1004) Accession : YP_003413119.1 Strain : Listeria monocytogenes 08-5578 Genome accession: NC_013766 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1131 EC number : - Position : 996728 - 997450 bp Length : 723 bp Strand : + Note : - DNA sequence : ATGTCAGAAATAGCGATTAAAGTTTCTAATTTAGATGTGAAAATTGGAAAGAAACAAATCTTAACCGATATGACTCTCGA AATAGAAAAGGGCGAGATATTTGGCTTAATAGGACCATCCGGTGCGGGGAAAACAACGCTCGTTAAAACCATCATTGGGA TGGAAAAAGCAACGAATGGCACAACCGAAGTGCTAGGAAAAGTAATGCCTAATTTACCCGTCATTAGTAAAATTGGATAT ATGGCCCAATCAGACGCACTTTATACTGATTTAACAGCCAAAGAAAACTTGGATTTTTTCGCTTCACTATATTCCATCAA AGGTGCTGCCAAGAAAGATCGAATGAATTATGCAGCTACTCTAGTTAATTTACAACAAGATTTAACCAAAAAGGTAAACA ATTATTCAGGAGGAATGAAGCGCAGGCTTTCACTTGCCATTTCTGTACTTGCTGACCCAGATGTCCTAATTCTAGATGAG CCAACAGTCGGCATTGATCCAGAACTAAGAAAAACAATTTGGGAAGAGCTAGGTGATCTAAAAGCGAACGGTAAATGCAT CCTTGTGACGACACACGTGATGGATGAAGCCGAAAAATGCGATAGACTTGCAATGATAAGAAATGGGGAAATAATCGCTG TAGGGACCCCACAAGAGCTCTCAAGCAAAACGTCATCTGGTAAGCTAGAAGATGCTTTTTTAGAGTTTGGAGGGAAGCAC TAA Protein sequence : MSEIAIKVSNLDVKIGKKQILTDMTLEIEKGEIFGLIGPSGAGKTTLVKTIIGMEKATNGTTEVLGKVMPNLPVISKIGY MAQSDALYTDLTAKENLDFFASLYSIKGAAKKDRMNYAATLVNLQQDLTKKVNNYSGGMKRRLSLAISVLADPDVLILDE PTVGIDPELRKTIWEELGDLKANGKCILVTTHVMDEAEKCDRLAMIRNGEIIAVGTPQELSSKTSSGKLEDAFLEFGGKH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH2613 | YP_254528.1 | hypothetical protein | Not tested | ¥ðSh2 | Protein | 6e-58 | 52 |
| SE0094 | NP_763649.1 | ABC transporter ecsA-like protein | Not tested | SCCpbp4 | Protein | 6e-55 | 52 |
| SH0081 | YP_251996.1 | hypothetical protein | Not tested | SCCmec | Protein | 1e-44 | 51 |
