|
Name : Gobs_0912 (Gobs_0912) Accession : YP_003408045.1 Strain : Geodermatophilus obscurus DSM 43160 Genome accession: NC_013757 Putative virulence/resistance : Unknown Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1004 EC number : 1.1.1.22 Position : 968205 - 969524 bp Length : 1320 bp Strand : - Note : KEGG: kra:Krad_3900 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase DNA sequence : ATGCGGGTCTCGGTCGTGGGTTGTGGTTACCTGGGCGCGGTGCACGCGGCGTCGATGGCCGAGCTGGGTCACGAGGTGGT CGGGATCGACGTCGACGAGCGCAAGGTCGCGGCGCTGAACGAGGCCCGGGCACCGTTCTTCGAGCCGGGTTTCGAAGACC TGCTGGCCCGCACGCTGGCCACCGGCCGGCTGCGGTTCAGCACCGACGTCGCCGACGCCGCCGGCGCGGCAGTGCACTTC GTGTGCGTGGGCACGCCGCAGAAGCGCGGGGAGTACGCCGCCGATCTGCGCTACGTACAGGCCGCGGTGGAGTCGCTGCT GGGCGTGCTGGCGCCCGGTGAGCTGGTCGTGGGCAAGTCCACGGTGCCGGTCGGCACCGCGGCCCGCCTCGCCGAGCTGG TGGCGCACAAGGTGCCGGGGGCCATGCTGGCGTGGAACCCGAAGTTCCTGCGCGAGGGGTTCGCCGTCCAGGACACCCTG CACCCCAACCGCCTCGTCTACGGCCTGCCCGCCGACCAGGACCGCGAGACCGCGGAGCGGATGCTCGACGAGGTCTACGC CGAGATCGTGACCCGCCAGACTCCCAAGGTGGTCACCGACTACGCCACCGCGGAGATGGTGAAGACCGCGGCCAACTCCT TCCTGGCCACGAAGATCAGCTTCATCAACGCGATGGCCGAGCTGTGCGAGGCCACCGGCGCCGACGTCAAGCTGCTGGCC GACGCGATCGGCTACGACGACCGGATCGGCCGGAAGTTCCTCAACGCCGGACTCGGCTTCGGCGGCGGCTGCCTGCCCAA GGACATCCGGGCGTTCATGGCCCGCGTCGGGGAGCTGGGTGCCGATCAGGCGCTGACGTTCCTGCGCGAGGTCGACAACA TCAACATGCGCCGCCGGATCCGGATGGTGGAGCTGGCCCGCGAGGTCTGCGACGGGTCGCTGCTCGGCAAGCACATCGCG GTGCTGGGGGCAGCCTTCAAGCCCGACTCCGACGACATCCGCGACTCCCCGGCGCTCAACGTCGCCGCCCAGCTGCAGCT GCAGGGCGCGGTGGTGTGCGTCACCGATCCGGCCGCGGTCGACAACGCCCGCCGCCAGTGGCCCCAGCTTGATTACGCGC CCACCGCCGAGCAAGCCGCGGCAGGCGCCGACGCCGTCCTGGTGCTCACCGAGTGGCGCCAGTACCGCCAGCTGGACCCG GTCGCCTTCGGGCAGATCGTGGCCGGCAAGCGGGTGCTCGACGGCCGCAACGCCCTGGACCGCGAGGCCTGGACCGCCGC GGGGTGGACCTACCGAGCCCTCGGTCGCCGCGCCGGCTGA Protein sequence : MRVSVVGCGYLGAVHAASMAELGHEVVGIDVDERKVAALNEARAPFFEPGFEDLLARTLATGRLRFSTDVADAAGAAVHF VCVGTPQKRGEYAADLRYVQAAVESLLGVLAPGELVVGKSTVPVGTAARLAELVAHKVPGAMLAWNPKFLREGFAVQDTL HPNRLVYGLPADQDRETAERMLDEVYAEIVTRQTPKVVTDYATAEMVKTAANSFLATKISFINAMAELCEATGADVKLLA DAIGYDDRIGRKFLNAGLGFGGGCLPKDIRAFMARVGELGADQALTFLREVDNINMRRRIRMVELAREVCDGSLLGKHIA VLGAAFKPDSDDIRDSPALNVAAQLQLQGAVVCVTDPAAVDNARRQWPQLDYAPTAEQAAAGADAVLVLTEWRQYRQLDP VAFGQIVAGKRVLDGRNALDREAWTAAGWTYRALGRRAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| udgA | YP_003784334.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 8e-76 | 50 |
| udgA | YP_005686369.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 8e-76 | 50 |
| udgA | YP_005682185.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 8e-76 | 50 |
