Gene Information

Name : Gobs_4885 (Gobs_4885)
Accession : YP_003411788.1
Strain : Geodermatophilus obscurus DSM 43160
Genome accession: NC_013757
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 5098793 - 5099530 bp
Length : 738 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: pol:Bpro_0239 short-chain dehydrogenase/reductase SDR

DNA sequence :
GTGGTGCTCGTGACCGGCGGCAGCCGCGGCATCGGCGCGGCGACCGCGCGCGCCGCGGCGGCGGCCGGGTGGTCGGTCGC
TCTCACGTACCGGGACGACGAGGCCGCGGCCGCCGCCGTCGTGACCGGCATCGAGGCCGCCGGCGGGACCGCGTGCGCCG
TGCGCGCCGACGTCTCGGTCGAGGACGACGTCCTGGCCGCCTTCGCCGCCGCCGCCGAGGGCCTCGGTCCGGTGACCGGG
CTGGTGGCCAACGCGGGGATCGTGGGACAGCGGGCGCGGGTCGACGAGCTGACCGCGGAGCGGGTGCAGCGGATGCTGGC
CGTGAACGTGCTCGGCACCGTCCTGTGCTGCCGGGAGGCGGTGCTGCGGATGTCCACCCGGCACGGCGGCTCGGGCGGGT
CCATCGTGCTGGTCTCCTCGGCCGCCAGCAGGCTCGGATCGCCCGGCGAGTACGTCGACTACGCGGCCAGCAAGGGCGCC
GTCGACACCCTCGGGGTCGGCCTCGCCCGCGAGGTGGCCGGGGAGGGGATCCGGGTCAACGTCGTGCGGCCCGGGATCAT
CGAGACGGAGATCCACGCCAGCGGCGGCCAGCCCGACCGGGTCGCGCGGGTGGGGCCGACGGTGCCGATGGGCCGGGCCG
GTCGCGCGGAGGAGGTGGCCGATGCGGTGCTGTGGCTGCTCGGCGACGGTGCGGGCTACTGCACCGGCAGCCTGCTCGAC
GTCGCCGGCGGCCGCTGA

Protein sequence :
MVLVTGGSRGIGAATARAAAAAGWSVALTYRDDEAAAAAVVTGIEAAGGTACAVRADVSVEDDVLAAFAAAAEGLGPVTG
LVANAGIVGQRARVDELTAERVQRMLAVNVLGTVLCCREAVLRMSTRHGGSGGSIVLVSSAASRLGSPGEYVDYAASKGA
VDTLGVGLAREVAGEGIRVNVVRPGIIETEIHASGGQPDRVARVGPTVPMGRAGRAEEVADAVLWLLGDGAGYCTGSLLD
VAGGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf29 AAO17195.1 Orf29 Not tested tcd island Protein 3e-43 57
VSAL_I1482 YP_002262921.1 glucose 1-dehydrogenase Not tested Not named Protein 2e-41 55