Gene Information

Name : Gobs_4722 (Gobs_4722)
Accession : YP_003411638.1
Strain : Geodermatophilus obscurus DSM 43160
Genome accession: NC_013757
Putative virulence/resistance : Resistance
Product : arsenical-resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0798
EC number : -
Position : 4937604 - 4938728 bp
Length : 1125 bp
Strand : -
Note : TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: kra:Krad_0502 arsenical-resistance protein

DNA sequence :
ATGAGCGACACCGTCGGCGAGACCGCCCGCCGCGGCACCGACCTCGACGCCCCGGTCCTGAACCGGCTGTCGACCCTCGA
CCGGTTCCTGCCGGTGTGGATCATCGCGGCGATGGCCGCCGGGCTGCTGCTCGGGCGCTTGATCCCCGGCCTGGATGACG
CCCTGGATGCCGTGAAGGTCGGCGACGTCAGCCTGCCGATCGCGATCGGGCTGCTGCTGATGATGTACCCGGTGCTGGCC
AAGGTTCGGTACTCCGAGCTCGACCGCGTCACCGGCGACCGCCGACTGTTGGGCGCCAGCCTGGCGCTCAACTGGCTGAT
CGGCCCTGCGTTGATGTTCGCGCTGGCCTGGCTGCTGCTGCCCGACCTGCCCGAGTACCGCACTGGATTGATCATCGTGG
GCCTGGCCCGATGCATCGCGATGGTGCTGATCTGGAATGACCTGTCCTGCGGCGACCGCGAGGCCGCCGCTGTCCTGGTG
GCGATCAACTCGGTCTTCCAGATCCTGGCCTTCGCGGCGCTGGGGTGGTTCTACCTGCAGGTGCTCCCGGGCTGGTTGGG
CCTGTCGACGACGTCGGCGGAGTTCAGCGTCTGGGCGATCGTGCTGTCGGTGCTGGTGTTCCTCGGCGTCCCGCTCGTCA
CCGGGTTCCTCACCCGCACGCTCGGCGAGCGGGCCCGCGGCCGTGAGCACTACGAGAGCCGGGTGCTGCCGCGGATCGGG
CCCATCGCGCTCTACGGGCTGCTGTTCACGATCGTCATGCTCTTCGCGCTGCAGGGCGACGCGATCACGTCGAATCCCTG
GGACGTCGCGCGGATCGCGCTGCCGCTGCTGGCCTACTTCTTCCTGATGTTCGGCGGGAGCTTCCTGCTGGGGATGCGTC
TGCGGCTCGGTTACGCGAAGACGGCCACGCTGGCCTTCACCGCGGCCGGCAACAACTTCGAGCTGGCCATCGCCGTGGCG
ATCGGCACGTTCGGTGTCACTTCCGGCCAGGCGCTGGCCGGTGTCGTCGGCCCGCTCATCGAGGTCCCTGTGCTGGTGGC
CCTCGTCTACGTGTCGCTCTGGGCCGCCCGCCGCTGGTTCCCGGGCGACCCCACCGTCCCCGCTGCCGTGAGGAGTGCCC
GATGA

Protein sequence :
MSDTVGETARRGTDLDAPVLNRLSTLDRFLPVWIIAAMAAGLLLGRLIPGLDDALDAVKVGDVSLPIAIGLLLMMYPVLA
KVRYSELDRVTGDRRLLGASLALNWLIGPALMFALAWLLLPDLPEYRTGLIIVGLARCIAMVLIWNDLSCGDREAAAVLV
AINSVFQILAFAALGWFYLQVLPGWLGLSTTSAEFSVWAIVLSVLVFLGVPLVTGFLTRTLGERARGREHYESRVLPRIG
PIALYGLLFTIVMLFALQGDAITSNPWDVARIALPLLAYFFLMFGGSFLLGMRLRLGYAKTATLAFTAAGNNFELAIAVA
IGTFGVTSGQALAGVVGPLIEVPVLVALVYVSLWAARRWFPGDPTVPAAVRSAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 1e-72 52
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 2e-72 52
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 9e-64 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gobs_4722 YP_003411638.1 arsenical-resistance protein BAC0573 Protein 1e-76 54
Gobs_4722 YP_003411638.1 arsenical-resistance protein BAC0004 Protein 2e-55 45