Gene Information

Name : Gobs_4391 (Gobs_4391)
Accession : YP_003411317.1
Strain : Geodermatophilus obscurus DSM 43160
Genome accession: NC_013757
Putative virulence/resistance : Virulence
Product : betaine-aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.8
Position : 4621957 - 4623399 bp
Length : 1443 bp
Strand : +
Note : PFAM: Aldehyde Dehydrogenase; KEGG: stp:Strop_0827 aldehyde dehydrogenase

DNA sequence :
ATGACACGACTGTTCGAGTACGCCCCCGCCCCCGAGTCGCGGTCCGTCGTCGACGTCGCGCCGTCCTACGGCCTGTTCGT
CGACGGCGAGTTCGTCGACGGGTCCGGCGCGCCCTTCACGACGATCAACCCGGCCACCGAGGAGGTCCTCTCCGAGGTCG
CCTCGGCCACCGACGCCGACGTCGACCGCGCCGTCCGCGCCGCCCGTCGCGCGTTCACCCGCGTGTGGGGGCCGATGCGC
CCGGCCGACCGCGGCAAGTACCTGTTCCGCATCGCCCGGCTGCTGCAGGAGCGGGCGCGGGAGTTCGCCGTCCTGGAGTC
GCTGGACAACGGCAAGCCGATCCGGGAGTCCCGCGACGTCGACGTCCCCCTGGCGGCGGCGCACTTCTTCTACCACGCGG
GATGGGCCGACAAGCTGGACTGGGCGGGCCTGGGCCCCGGCCCGAAGCCGCTGGGCGTGGCCGGCCAGGTCATCCCGTGG
AACTTCCCGCTGCTGATGCTGGCGTGGAAGGTCGCCCCGGCGCTGGCCACCGGCAACACCGTCGTCCTCAAGCCGGCCGA
GACCACGCCGCTGACCGCACTGCTGTTCGCGGAGGTCTGCCGCCAGGCCGACCTGCCACCGGGCGTCGTCAACATCGTGA
CCGGGGCCGGCGAGACCGGTCGGGCCGTCGTCGAGCACGAGGACGTCGACAAGGTCGCGTTCACCGGGTCGACGGAGGTG
GGCCGCTCCATCGCCCGCGCGGTCGCCGGCACCCGCAAGAAGCTCACCCTGGAGCTCGGCGGCAAGGCGGCCAACATCGT
CTTCGACGACGCCCCGATCGACCAGGCCGTCGAGGGCATCGTGCAGGGCATCTTCTCCAACCAGGGCCACGTCTGCTGCG
CCGGCAGCCGGCTGCTGGTGCAGGAGAACGTCCACGACGAGGTCATCGCCTCGCTGCAGCGGCGCATCGGCACCCTGCGC
CTCGGCGACCCGCTCGACAAGAACACCGACATCGGCGCGATCAACTCCGCGGAGCAGCTGGCCCGCATCCGGGAGCTGTC
CGAGATCGGCGAGGCCGAGGGCGCGAACCGCTGGCAGCCGGCCTGCGAGCTGCCCGAGCGCGGCTTCTGGTTCCCGCCGA
CCGTCTTCACCGACGTCTCCCCCGCGCACCGCATCGCCCGCGACGAGGTGTTCGGGCCGGTCCTCTCGGTGCTCACCTTC
CGCACGCCCGACGAGGCCGTCGCCAAGGCGAACAACACCACCTACGGGCTCTCGGCCGGCATCTGGACCGAGAAGGGCTC
GCGGATCCTCGCGATCGCCGACCGGCTGCGCGCCGGCGTGGTCTGGGCCAACACCTTCAACAAGTTCGACCCGACGTCGC
CGTTCGGCGGGTACAAGCAGTCCGGCTACGGCCGCGAGGGCGGCCGGCACGGGCTCGCCGCGTACCTGGAGGGGGTCCAG
TGA

Protein sequence :
MTRLFEYAPAPESRSVVDVAPSYGLFVDGEFVDGSGAPFTTINPATEEVLSEVASATDADVDRAVRAARRAFTRVWGPMR
PADRGKYLFRIARLLQERAREFAVLESLDNGKPIRESRDVDVPLAAAHFFYHAGWADKLDWAGLGPGPKPLGVAGQVIPW
NFPLLMLAWKVAPALATGNTVVLKPAETTPLTALLFAEVCRQADLPPGVVNIVTGAGETGRAVVEHEDVDKVAFTGSTEV
GRSIARAVAGTRKKLTLELGGKAANIVFDDAPIDQAVEGIVQGIFSNQGHVCCAGSRLLVQENVHDEVIASLQRRIGTLR
LGDPLDKNTDIGAINSAEQLARIRELSEIGEAEGANRWQPACELPERGFWFPPTVFTDVSPAHRIARDEVFGPVLSVLTF
RTPDEAVAKANNTTYGLSAGIWTEKGSRILAIADRLRAGVVWANTFNKFDPTSPFGGYKQSGYGREGGRHGLAAYLEGVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 3e-62 43
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-65 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gobs_4391 YP_003411317.1 betaine-aldehyde dehydrogenase VFG0082 Protein 1e-65 42