Gene Information

Name : Gobs_4333 (Gobs_4333)
Accession : YP_003411266.1
Strain : Geodermatophilus obscurus DSM 43160
Genome accession: NC_013757
Putative virulence/resistance : Virulence
Product : UDP-N-acetyl-D-glucosamine 2-epimerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0381
EC number : -
Position : 4557814 - 4558971 bp
Length : 1158 bp
Strand : -
Note : TIGRFAM: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing; PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: dvm:DvMF_1846 UDP-N-acetylglucosamine 2- epimerase

DNA sequence :
GTGACGGCTCCGGGACGGCCCCGGCGCGTCGTCGGCCTCACCGGCACGCGCGCGGACTTCGGCAAGATGCGCGACGTCTA
CCTGGGGCTGCAGGAGGCCCCGGGCATCGAGTTCTCCCTCGTCGTCACCGGCATGCACCTGCTGCACCGCTACGGGTACA
CGCTGCGCGAGATCGAGCGAGCGGGGCTGCGGCACCTGCACCACGTGCCGAACCAGGTCGAGGACGAGCCGATGGCGCTG
GTGCTGGCCAACAGCATCAACTCGATCGCCCGGCTGCTGCTCGCCGAGTCCGCGGACATGGTGCTCGTGCACGGGGACCG
GGTCGAGGCGCTGGCCGGCGCGCTGGCCGGCAGCCTCACCAACACCCGCGTCGCGCACGTCGAGGGCGGCGAGGTCTCCG
GGACCATCGACGACGCCATCCGGCACTCGCTGAGCAAGCACGCCCACGTGCACTTCGTCGCCAACGACCACGCCCGCGCC
CGGCTGCTGCAGCTGGGCGAGGAGGTCGACCGGGTGCTGGTCGTCGGCAGCCCGGAGGCCGACGCGCTGGCGGTGGCGGC
GGACTCGGACCTGGGCCCGGTGCGCGAGCACTACGGCACCCCGGCCCCGCCCTACGGCGTGCTGGCCCTGCACCCGGTGA
CCACCGAGCTGGAGCTCAACCGGCGGCACGCCGAGGCGGTCGTCGACGGCGTCCTCGCCGCCGGCGGCTCCTGGGTGGTC
ATCGACCCCAACAACGACGAGGGCACCCACGACGTCCGGGCCGCGCTCGAGCGGCTCGACGGCCGCCCGGACGTCGTCCG
GCTGCCGTCCATGCGCTTCCGGGCCTACCTCTCGCTGGTCCGCCACGCCGAGGTCGTCGTCGGCAACTCCAGCAGCGGCG
TCCGGGAGGCGCCGGTGCTCGGCACGCCGTCGGTCGACGTCGGGTCGCGGCAGACCGACCGCTCCCCGGCCGCCTCGGTG
CATCACGTGCCGGCCGTGGCGGAGGAGGTGGCCCGCGCGATCGGGGCCGCGCGGGCCGCGGGCCGCAGCCGGCCGGAGGA
GCACTTCGGCTCCGTCGGCGCCGCCGGGCGGATCGTCGAGGCGGTCTGCGGGGACGACGTGTGGGCCCTGGGGTTGCAGA
AGCGCTTCGTCGACCGGCCGCTGGCCGAGGGCGTCTAG

Protein sequence :
MTAPGRPRRVVGLTGTRADFGKMRDVYLGLQEAPGIEFSLVVTGMHLLHRYGYTLREIERAGLRHLHHVPNQVEDEPMAL
VLANSINSIARLLLAESADMVLVHGDRVEALAGALAGSLTNTRVAHVEGGEVSGTIDDAIRHSLSKHAHVHFVANDHARA
RLLQLGEEVDRVLVVGSPEADALAVAADSDLGPVREHYGTPAPPYGVLALHPVTTELELNRRHAEAVVDGVLAAGGSWVV
IDPNNDEGTHDVRAALERLDGRPDVVRLPSMRFRAYLSLVRHAEVVVGNSSSGVREAPVLGTPSVDVGSRQTDRSPAASV
HHVPAVAEEVARAIGAARAAGRSRPEEHFGSVGAAGRIVEAVCGDDVWALGLQKRFVDRPLAEGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
synX NP_273134.1 polysialic acid capsule biosynthesis protein SynX Not tested IHT-A Protein 2e-58 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gobs_4333 YP_003411266.1 UDP-N-acetyl-D-glucosamine 2-epimerase VFG0254 Protein 7e-59 41