Gene Information

Name : Gobs_3543 (Gobs_3543)
Accession : YP_003410502.1
Strain : Geodermatophilus obscurus DSM 43160
Genome accession: NC_013757
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 3728917 - 3729810 bp
Length : 894 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV_933 ABC transporter ATP-binding protein

DNA sequence :
ATGATCACGGTCTCAGGCCTCACCAGGCAGTACGGCAAGCGGCTGGCCGTCGACGACATGACCTTCGACGTGGCGGCCGG
CCGCGTCACAGGGTTCGTCGGCCCGAACGGCGCCGGGAAGTCGACCACCATGCGGATGATGGTGGGGCTCACCCGACCCG
ACAGCGGTGAGGTCCGCTATCACGGCGTTCACTACCAGGACCTCAAGTGGCCGGCTCGGTCCGTCGGATGCGTCCTCGAC
GCCCGTGTGCATCCCGGCCGCACGGCTCTGAACCACCTCCGGGCCACCGCCGCCATCAGCCGTGTCCCGGCCGGCCGGGC
CGAGCAGGTCCTAGCCGAGGTCGGCCTGGAGACGGCAGCGAATCAGCGGGCGGGCCAGTTCTCTCTTGGTATGCGGCAGC
GCCTGGCGCTGGCGGCAGCCCTGCTGGGCGACCCCCAAATCCTGCTGCTGGACGAACCGTCCAACGGTCTGGACCCCGAC
GGCATCCGCTGGCTGCGCAACTATCTCAGCGACTTCGCCGCTCGAGGCGGCACGGTCTTCGTGTCCAGCCACCTCATCAG
CGAGCTCAGCATGTTCGCCGACGACCTCGTTGTGATCGGCGGCGGACGGTTGCTCGCTGCTGAGTCGGTTGAGGCGATCA
CCGGGCGCCACGACGTCGCCGTGATCGTCGAGACCCCGCAGCCAGTTGAACTCGTCGCACTTCTCGCCGCGTACGGCTTC
GTCGTTGAAGCCGCGGCCGACTGGCTCATCGTCCGGGGAACCACCCGAACCGTGGTCTCGCAGATCGCGTTCGACAGCGG
CATCCGCGTGCTCGAGCTCACCGAGACGTCTCGCTCGCTCGAGGACAGCCTGCTCGACATGACCAGGACGTCCGCCGAGT
TCGCCTCTACCTGA

Protein sequence :
MITVSGLTRQYGKRLAVDDMTFDVAAGRVTGFVGPNGAGKSTTMRMMVGLTRPDSGEVRYHGVHYQDLKWPARSVGCVLD
ARVHPGRTALNHLRATAAISRVPAGRAEQVLAEVGLETAANQRAGQFSLGMRQRLALAAALLGDPQILLLDEPSNGLDPD
GIRWLRNYLSDFAARGGTVFVSSHLISELSMFADDLVVIGGGRLLAAESVEAITGRHDVAVIVETPQPVELVALLAAYGF
VVEAAADWLIVRGTTRTVVSQIAFDSGIRVLELTETSRSLEDSLLDMTRTSAEFAST

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 2e-37 43
SSU05_0910 YP_001198276.1 transport ATP-binding protein Not tested 89K Protein 9e-31 41
SSU98_0915 YP_001200473.1 transport ATP-binding protein Not tested 89K Protein 9e-31 41