Gene Information

Name : Gobs_0293 (Gobs_0293)
Accession : YP_003407466.1
Strain : Geodermatophilus obscurus DSM 43160
Genome accession: NC_013757
Putative virulence/resistance : Unknown
Product : AMP-dependent synthetase and ligase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG0318
EC number : -
Position : 309594 - 311195 bp
Length : 1602 bp
Strand : -
Note : PFAM: AMP-dependent synthetase and ligase; KEGG: rha:RHA1_ro05328 CoA ligase

DNA sequence :
GTGGCGCTGGCCAGCCGTTACCCCGACGTCGAGATCCCCGACGTCTCCGTCCCCGAGTTCGTCCTCGCCGCCGGTCGGGA
CAAGCCCGACGCGCCCGCGCTCATCGACGGCCTCAGGGGCGACGTCATCACCCACGGCCAGCTGGCCGCCTACGTCGACC
GGGTGGCCGCCGCACTGCACGCCCGGGGCCTGCGCAAGGGCGACGTCGTCGCGATGTTCTGCCCCAACACCCCCTGGTAC
CCGGTGGTCTTCCACGGCATCGCCGCCGCCGGCTGCGTCATGTCACCGATCAACTCGCTGTACACGCCCGACGAGATCGC
CTTCCAGCTGCGCGACTCGGGCGCGAAGATCCTGATCACCGTCTCGCCGTTCCTCGACCGGGCGCTGGCCGCCGTCGAGA
AGGCGCCGGTCGGCGAGATCGTCGTCATGGACGGCGCCGAGGGCCACGCCTCCCTGGTCGACCTGCTGAGCACCGATGCA
CCGTCGGCGCAGGTCGACTTCGACCCGGCCGACGACCTGGTCACGCTCCCCTACTCCAGCGGCACCACGGGCCTGCCCAA
GGGAGTCATGCTCACCCACCGAAACCTGGTGGCCAACGTGGCGCAGTGCCGGCCGCTGATCCAGCTCGGCGCGGACGAGC
GAATCATCGCCGTCCTGCCGTTCTTCCACATCTACGGCCTCACCGTGCTGATGAACCAGGGCCTCGCGTGGGGCGGCGCG
GTCGTGACGCTGCCCCGCTTCGACCTCGAGGACTTCCTGCGCACCATCCAGGACCACAAGATCACCCGGGCGTTCGTGGC
GCCGCCCATCGTGCTGGCGCTGGCGAAGCACCCGCTGGTCGACCAGTACGACCTGTCGTCGCTGACCTCGGTCCTCTCGG
GTGCCGCCCCGCTGGACGAGCAGCTCGCCCTCGCCGCCGAGAAGCGGCTGCGCAAGGGCGCCGACAGCGGCGTCACGGTG
GCCCAGGGCTACGGCATGACCGAGCTGTCACCGGTCTCGCACACCACCCCCGACCTCGGCGCGGAGCCGCCGGGTGCAGC
CCCGGGCTCGGTGCCCAAGGGCTCCGTCGGCTTCGCCGTCCCGAACTCCGAGTGCCGGCTGGTCGACCCGGCCACCGGTG
AGGACGCCGCCCCGGGCACCCGCGGCGAGCTGTGGGTCCGCGGCCCGAACGTCATGAAGGGCTACCTGAACAACCCCACG
GCGACGGCCGACACGATCGACGCCGACGGCTGGCTGCACACCGGTGACGTCGCCGTCGTCGACGAGAACGGCTGCTACAC
CGTCGTCGACCGCGTCAAGGAACTGATCAAGTACAAGGGCTACCAGGTGGCCCCGGCCGAGCTCGAGGCCGTGCTGATCG
GCCACCCGGAGATCGCCGACGCGGCCGTCATCGGCGTGCCGGACGAGGAGAGCGGCGAGGAGCTGCCGAAGGCCTTCGTC
GTCCGGGCCCCCGGCTCCACGCTCACCCAGGACGCGGTCATCGAGTACATGGCGGGCAAGGTGGCGCCGCACAAGAAGAT
CCGCATCGTCGAGTTCATCGAGGCGGTGCCGAAGTCCGCGGCCGGCAAGATCCTGCGCAAGGACCTCCGCGCGGCGGGTT
GA

Protein sequence :
MALASRYPDVEIPDVSVPEFVLAAGRDKPDAPALIDGLRGDVITHGQLAAYVDRVAAALHARGLRKGDVVAMFCPNTPWY
PVVFHGIAAAGCVMSPINSLYTPDEIAFQLRDSGAKILITVSPFLDRALAAVEKAPVGEIVVMDGAEGHASLVDLLSTDA
PSAQVDFDPADDLVTLPYSSGTTGLPKGVMLTHRNLVANVAQCRPLIQLGADERIIAVLPFFHIYGLTVLMNQGLAWGGA
VVTLPRFDLEDFLRTIQDHKITRAFVAPPIVLALAKHPLVDQYDLSSLTSVLSGAAPLDEQLALAAEKRLRKGADSGVTV
AQGYGMTELSPVSHTTPDLGAEPPGAAPGSVPKGSVGFAVPNSECRLVDPATGEDAAPGTRGELWVRGPNVMKGYLNNPT
ATADTIDADGWLHTGDVAVVDENGCYTVVDRVKELIKYKGYQVAPAELEAVLIGHPEIADAAVIGVPDEESGEELPKAFV
VRAPGSTLTQDAVIEYMAGKVAPHKKIRIVEFIEAVPKSAAGKILRKDLRAAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1475 YP_001800869.1 acyl-CoA synthetase Not tested Not named Protein 2e-101 46