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Name : Gobs_0278 (Gobs_0278) Accession : YP_003407452.1 Strain : Geodermatophilus obscurus DSM 43160 Genome accession: NC_013757 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 294190 - 295491 bp Length : 1302 bp Strand : + Note : KEGG: msm:MSMEG_6413 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl- tRNA synthetase, class IIa-like DNA sequence : GTGATCGACCTGCGCCTGGTGCGCGAGCACCCCGACCTCGTCAAGGCCAGCCAGCGAGCCCGCGGGGCCGACGAGTCCCG GGTCGACGAGCTGCTCGCTGCCGACGCCGCCCGCCGCGAGGCGGTCAAGCGCACCGACGACCTGCGCGCGGAGCAGAAGG CGGCCTCCCAGGCGGTGAAGAAGGCGAGTTCGGAGGAGCGGCCCGCCGTCCTGGACCGGGCCCGGGCGCTCGCGGCCGAG GTCAAGGACGCCGAGGAGGCGCTGCGGGGAGCCGACGCGGCGCTGCGCGCGGCACACCTGCGCATCGCCAACGTGGTGCA CGACGGCGTCCCGCCCGGCGGTGAGGACGACGCGGTGACCCTGCGCACCGTCGGCGAGGTGCCCGCCTACGACTTCCCGG TGCGCGACCACCTGGAGATCGGCGAGGCCCTCGGCGCGATCGACACGGAGCGCGGCGCCAAGGTCTCCGGCGCCCGCTTC TACTTCCTCACCGGCCCGGGCGCCATGCTCGAGTTCGCCCTGGCCCAGCTGGCGATCGGCCAGGCCGTCTCGGCCGGCTT CACCCCCGTCGTCGCCCCCGCGCTGGTGCGCCCCGAGGCGATGGAGGGCACCGGGTTCCTGGGCGAGCACGACGAGGAGG TCTACCGGGTCGAGCGCGACGACCTCTACCTGGTCGGCACCTCCGAGGTCGCGCTCGCCGGCATGCGCAGCAACGAGGTG CTCGACCTGTCGGCCGGGCCGCTGCGCTACGCCGGCTGGTCCTCCTGCTTCCGCCGCGAGGCCGGCTCCTACGGCAAGGA CACCCGCGGCATCATCCGCGTGCACTGGTTCGACAAGGTCGAGATGTTCAGCTTCTGCCGGCCCGAGGACGCCGCCGAGG AGCATCGGCGCCTGCTGGCCTGGGAGGAGGAGTTCCTCCAGGCCCTCGAGCTGCCGTACCGGGTCGTCGACATCGCCGCC GGCGACCTGGGCACCAGCGCCGCCCGCAAGTACGACATCGAGGCCTGGTTCCCCAGCCAGGGCACCTACCGCGAGCTGAC GAGCACCTCGGACTGCACGACCTTCCAGGCGCGGCGGCTGAACACCCGCTACCGGGACGCCGAGGGGAAGAACCAGACCG CGGCCACGCTCAACGGCACGCTCTGCGCGGTCGCCCGCACCATCGCCTGCCTGCTGGAGGTGCACCAGCGTGCCGACGGG TCGGTGTACGTGCCCAAGGCGCTGCGTCCCTGGCTCGGCGGCGTCGAGGCCCTCACCCCCGGCATGACGCTCGTGGCCCC CGTGCCGGCACCGAACGCATGA Protein sequence : MIDLRLVREHPDLVKASQRARGADESRVDELLAADAARREAVKRTDDLRAEQKAASQAVKKASSEERPAVLDRARALAAE VKDAEEALRGADAALRAAHLRIANVVHDGVPPGGEDDAVTLRTVGEVPAYDFPVRDHLEIGEALGAIDTERGAKVSGARF YFLTGPGAMLEFALAQLAIGQAVSAGFTPVVAPALVRPEAMEGTGFLGEHDEEVYRVERDDLYLVGTSEVALAGMRSNEV LDLSAGPLRYAGWSSCFRREAGSYGKDTRGIIRVHWFDKVEMFSFCRPEDAAEEHRRLLAWEEEFLQALELPYRVVDIAA GDLGTSAARKYDIEAWFPSQGTYRELTSTSDCTTFQARRLNTRYRDAEGKNQTAATLNGTLCAVARTIACLLEVHQRADG SVYVPKALRPWLGGVEALTPGMTLVAPVPAPNA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-58 | 46 |
