Gene Information

Name : Gobs_0219 (Gobs_0219)
Accession : YP_003407395.1
Strain : Geodermatophilus obscurus DSM 43160
Genome accession: NC_013757
Putative virulence/resistance : Resistance
Product : sodium solute transporter superfamily protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 228262 - 229920 bp
Length : 1659 bp
Strand : +
Note : TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: kra:Krad_3659 SSS family solute/sodium (Na+) symporter

DNA sequence : 
ATGCTCTTCGCTGCCCCCGCCGCTCCGGCGACGACCACCGTCGGGAACCCGGCGGTCAACATCTCGATCTTCGGGGCCTT
CGTCCTCGTCACGCTGGCCATCACCTTCAAGGCCAGCCGCAACAACAAGAGCGCGGCCGACTACTACGCCGCCGGCCGCA
ACATCAGCGGCACCCAGAACGGCCTGGCCATCGCGGGTGACTACCTGTCGGCCGCGTCGTTCCTCGGCATCGCCGGCGCC
ATCGCCATCTACGGCTACGACGGCTTCCTGTACTCCGTCGGCTTCCTCGTCGCCTGGCTGGTCGCCCTCCTGCTCGTCGC
CGAGCTCATGCGCAACACGGCGCGGTACACGATGGCCGACGTGCTGGCCTTCCGGATGCGCCAGCGGCCCGTCCGCACCG
CGGCGGCGACCTCGACCCTCGTGGTCAGCCTCTTCTACCTGCTCGCCCAGATGGCCGGCGCCGGCGCGCTGGTCACTCTC
CTGCTCGGTGTCACCGGAGAGCTGGCGCAGGCGGTCGTCGTGATCCTCGTCGGTGCGCTGATGATGGTCTACGTGCTCGT
CGGTGGCATGCGCGGCACGACCTACGTGCAGATCATCAAGGCGACACTGCTCATCGCCGGCGCCGCCGTGATGACGGTCT
GGGTGCTGGGCAAGTACGGCTTCAACCTCTCCGCGCTGCTCGGCGGCGCGGTCGAGACCTCGGCGACCCAGGCCACACCG
CGCGACGTCCTGTCCCCGGGGGGCCAGTACGGCGCCACCAGCATCTCGAAGCTGGACTTCATCTCGCTGGCGCTCGCGCT
GGTGTTCGGGACGGCCGGCCTGCCGCACGTGCTGATGCGCTTCTACACCGTGCCGACGGCGAAGGACGCCCGTCGCTCGG
TGGTCTGGGCGATCTGGCTGATCGGCATCTTCTACCTGTTCAGCCTGGTGATCGGCTACGGCGCGGGCGCGCTGGTCGGC
GCGGACACCATCCTGGCGGCGCCCGGAGCGGTCAACGCGGCAGCGCCGCTGCTGGCCTTCGAGCTCGGCGGCACGATCCT
GCTCGGCGTCATCGCCGGCGTCGCGTTCGCGACGATCCTCGCGGTGGTCGCCGGCCTGACGATCACCGCGTCGGCGTCCT
TCGCGCACGACATCTACGCCTCGGTCATCAAGAAGGGCCAGGGGAACCCGGAGGCCGAGGTCAAGGTGGCCCGGATCGCC
GCGGTCGTGATCGGCGCCATCTCCATCGGGTTGGGCATCCTGGCGCTGCAGGCCGGGCTGAACATCGCCTTCCTGGTGGC
TCTGGCGTTCGCCATCGCCGCCTCGGCGAACCTGCCGACGATCATCTACACCCTGTTCTGGCAGCGGTTCACCACGCAGG
GCGCGCTCTGGTCGATCTACGGCGGCCTGATCGCCTGCGTGACGCTCATCCTGTTCTCGCCGGTGGTGTCCGGGGCGCCC
GTCAACCCGGCGACCGGCAAGAGCCCGTCGCTGATCCAGAACGTCGACTTCTCCTGGTTCCCGCTGAACAACCCCGGCCT
CGTGTCCATCCCGCTGTCGTTCTTCCTCGGCTGGCTCGGCACGAAGCTGTCCAAGGAGCAGCCCGACGAGCTCAAGAACG
CCGAGCTCGAGGTGCGGGCACTCACCGGGATCGGTGCGGAGAAGGCCGTCGCCCACTGA

Protein sequence : 
MLFAAPAAPATTTVGNPAVNISIFGAFVLVTLAITFKASRNNKSAADYYAAGRNISGTQNGLAIAGDYLSAASFLGIAGA
IAIYGYDGFLYSVGFLVAWLVALLLVAELMRNTARYTMADVLAFRMRQRPVRTAAATSTLVVSLFYLLAQMAGAGALVTL
LLGVTGELAQAVVVILVGALMMVYVLVGGMRGTTYVQIIKATLLIAGAAVMTVWVLGKYGFNLSALLGGAVETSATQATP
RDVLSPGGQYGATSISKLDFISLALALVFGTAGLPHVLMRFYTVPTAKDARRSVVWAIWLIGIFYLFSLVIGYGAGALVG
ADTILAAPGAVNAAAPLLAFELGGTILLGVIAGVAFATILAVVAGLTITASASFAHDIYASVIKKGQGNPEAEVKVARIA
AVVIGAISIGLGILALQAGLNIAFLVALAFAIAASANLPTIIYTLFWQRFTTQGALWSIYGGLIACVTLILFSPVVSGAP
VNPATGKSPSLIQNVDFSWFPLNNPGLVSIPLSFFLGWLGTKLSKEQPDELKNAELEVRALTGIGAEKAVAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 1e-99 58

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gobs_0219 YP_003407395.1 sodium solute transporter superfamily protein BAC0564 Protein 7e-59 44