Gene Information

Name : Gobs_2062 (Gobs_2062)
Accession : YP_003409121.1
Strain : Geodermatophilus obscurus DSM 43160
Genome accession: NC_013757
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2143896 - 2146439 bp
Length : 2544 bp
Strand : +
Note : PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; AAA ATPase central domain protein; UvrB/UvrC protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; KEGG: stp:Strop_2156 ATPase

DNA sequence :
ATGACCAGCCCCTTCTACCCGGGCCCCTACGGGAGCCCCTTCGACGACTTCTTCGCCCGCTTCACCAGAGGGGGACAGCA
GCCGCAGCGGCAGCGGATCGACATCACCCAGTTCCTCAGCCAGCAGGCGCGGGAACTGGTCAACGCCGCGGCGCACCAGG
CGGTGGCCGGCGGCAGCGCCGACCTGGGCACCGAGCACCTGCTCTGGGCGATGACGGGCGACGAGAGCACCCGCCAGTTC
CTGGCCCGCTCGGGCACCGACCCCGACCGGCTGCGCTCCTCCCTCGAGGAGCAGCTGGTGCGTGGCGAGCCCCGGGACGA
GCCGCCGTCCCTCACCCCGGCCGCCAAGCGCGCCCTCCTCGACGCCCACCGCGTCTCCCGCGCCCTGGGCTCGACCTACA
TCGGGCCCGAGCACCTGCTGTTCGCCCTGGCCGTCAACCCCGACTCCCCGGGCGGGCGGGCGCTGCGCGAGCAGGGCGTC
ACCCCGGAGGCCCTCCAGCAGGCGGCCACCGGCGGTCCGCAGCCCGGCGCGGGTGGACGCTCCGGCGGCCCCGGCCAGGC
CGGTCCGTCGAACACGCCGACCCTCGACGAGTTCGGCCGCGACCTGACCCAGCTGGCCCGCGACGGCCGGATCGACCCGG
TGATCGGCCGTGAGCTGGAGATCGAGCAGACCGTCGAGGTGCTCTCCCGGCGGCGGAAGAACAACCCGGTGCTCATCGGC
GAGGCCGGCGTCGGCAAGACCGCGATCGTCGAGGGCATCGCCGCGCAGATCGTCGAGGGCGACGTGCCGGAGACCCTCCG
CGGCCGGCGGCTCGTCGAGCTCGACCTGACCGGCCTGGTGGCCGGGACCCGCTACCGCGGCGACTTCGAGGAGCGGCTCA
AGAAGGTCATGGACGAGATCCGCGAGCACTCCGACGAGGTCATCGTCTTCATCGACGAGCTGCACACCGTCGTCGGGGCC
GGCGCCTCCGAGGGCTCCGGCGGCGCGGGCAACATGCTCAAGCCGGCCCTGGCCCGCGGCGAGCTGCACATCATCGGCGC
GACCACGCTCGACGAGTATCGCCGCAACATCGAGAAGGACGCGGCGCTGGAGCGCCGGTTCCAGCCGATCCTGGTGCCGG
AGCCCGGCGTCGAGGACACCGTGCAAATCCTCTGCGGCCTGCGGGACCGGTACGAGGCCCACCACGGGGTGCGCTTCACC
GACGACGCGATCCGGGCCGCGGTGGAGCTGTCCGACCGCTACGTGACCGACCGGCACCTGCCCGACAAGGCGATCGACCT
CATCGACCAGGCCGGCGCTCGCGTGCGGCGGCGGGTGAAGACGCCGCCGACCGACCTGCGCGGCCTCGAGCAGGAGGTCG
AGCGGCTGCAGCGGGAGAAGGACCAGGCCGTCGCCGCCGAGCAGTACGAGCGGGCCTCCGAGCTGCGCGACCAGCTGGCC
GAGGCGCAGGCGCGCCTGGAGCAGGCGCGGTCGGGCGGCGGGCAGCCCGGCGTCCCGGAGGTCGGCGTCGAGGACATCGC
CGAGGTGGTCTCGCGCAGCACCGGCATCCCGGTCAGCCAGCTCACGCAGGAGGAGGTGCAGCGGCTGCTCGGGCTCGAGG
ACCACCTGCACCAGCGGGTCGTCGGCCAGGACGACGCCGTCCGCGTGGTCGCCGAGGCGGTGCGCCGCTCGCGGGTCGGC
CTGGGCGACCCCGACCGGCCGATCGGCAGCTTCCTGTTCCTCGGGCCCACCGGCGTCGGCAAGACCGAGCTGGCGCGGGC
GCTGGCCGAGGCGCTGTTCGGCGACGAGGACCGGATGATCCGGCTGGACATGAGCGAGTTCCAGGAGCGGCACACCGTCA
GCCGCCTCGTGGGCTCCCCGCCCGGGTACGTCGGGTACGAGGACGCCGGCCAGCTCACCGAGGCGGTGCGCCGGCGGCCC
TACTCGGTGGTGCTGCTGGACGAGATCGAGAAGGCGCACCCCGACGTCTTCAACACCCTGCTGCAGGTGCTCGACGACGG
CCGGCTCACCGACTCGCAGGGCCGCACGGTCGACTTCAAGAACACCGTGCTGATCATGACCAGCAACCTGGGCTCGGAGC
TGATCCAGGGCCGCAACACCCCGCTCGGGTTCGGCGCCGGGAACGCGGCGGCCTCGGACGACGGGCTGCGCGAGCGGTTG
CTGCGGCGGCTGCGCGAGCAGTTCCGCCCGGAGTTCCTCAACCGCGTCGACGAGATCGTGGTGTTCCAGCAACTGGAGAC
CGAGCAGCTGGCGCAGATCACCCGGCTGCTGCTCGACGAGACGCGCCGGCGGCTGGCGGCCCAGGACATCGAGGTGACCG
TCACCGACGAGGCGGTCACCTGGATCGCCGAGCATGGTTTCGAGCCGCAGTTCGGCGCCCGGCCGCTGCGCCGGGCCATC
CAGCGGGAGGTCGACAACCCGCTGTCGCGGCTGCTGCTCGACGGCCGGCTGGGGTCGGGCCGGAGGGTCACGGTCGGGGT
GCGGGACGGCGCCCTCGACTTCTCCGTCGACCAGCCCGCGGAGGCCGCTCCGGCAGGCGTCTGA

Protein sequence :
MTSPFYPGPYGSPFDDFFARFTRGGQQPQRQRIDITQFLSQQARELVNAAAHQAVAGGSADLGTEHLLWAMTGDESTRQF
LARSGTDPDRLRSSLEEQLVRGEPRDEPPSLTPAAKRALLDAHRVSRALGSTYIGPEHLLFALAVNPDSPGGRALREQGV
TPEALQQAATGGPQPGAGGRSGGPGQAGPSNTPTLDEFGRDLTQLARDGRIDPVIGRELEIEQTVEVLSRRRKNNPVLIG
EAGVGKTAIVEGIAAQIVEGDVPETLRGRRLVELDLTGLVAGTRYRGDFEERLKKVMDEIREHSDEVIVFIDELHTVVGA
GASEGSGGAGNMLKPALARGELHIIGATTLDEYRRNIEKDAALERRFQPILVPEPGVEDTVQILCGLRDRYEAHHGVRFT
DDAIRAAVELSDRYVTDRHLPDKAIDLIDQAGARVRRRVKTPPTDLRGLEQEVERLQREKDQAVAAEQYERASELRDQLA
EAQARLEQARSGGGQPGVPEVGVEDIAEVVSRSTGIPVSQLTQEEVQRLLGLEDHLHQRVVGQDDAVRVVAEAVRRSRVG
LGDPDRPIGSFLFLGPTGVGKTELARALAEALFGDEDRMIRLDMSEFQERHTVSRLVGSPPGYVGYEDAGQLTEAVRRRP
YSVVLLDEIEKAHPDVFNTLLQVLDDGRLTDSQGRTVDFKNTVLIMTSNLGSELIQGRNTPLGFGAGNAAASDDGLRERL
LRRLREQFRPEFLNRVDEIVVFQQLETEQLAQITRLLLDETRRRLAAQDIEVTVTDEAVTWIAEHGFEPQFGARPLRRAI
QREVDNPLSRLLLDGRLGSGRRVTVGVRDGALDFSVDQPAEAAPAGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 3e-164 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gobs_2062 YP_003409121.1 ATPase AAA-2 domain-containing protein VFG0079 Protein 2e-175 53
Gobs_2062 YP_003409121.1 ATPase AAA-2 domain-containing protein VFG0080 Protein 7e-142 52