Gene Information

Name : Gobs_1983 (Gobs_1983)
Accession : YP_003409049.1
Strain : Geodermatophilus obscurus DSM 43160
Genome accession: NC_013757
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 2056165 - 2056359 bp
Length : 195 bp
Strand : -
Note : PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: dac:Daci_3732 XRE family transcriptional regulator

DNA sequence :
GTGCGCAATGCGGTGCGGGCGCTGCGGATGCAGCGTGGACTGTCGCAGGGGGACCTGGCGGTGGTGATGGGCGTCTCGCG
CCAGACCATCAACTCGATCGAGACCGGACGGTACCTACCGTCCTTACCGCTCGCGATCGGGTTGGCGCGCTTCTTCAAGA
CGACGGTGGAGGAGGTCTTCGATGTCGCTGAGTGA

Protein sequence :
MRNAVRALRMQRGLSQGDLAVVMGVSRQTINSIETGRYLPSLPLAIGLARFFKTTVEEVFDVAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 5e-10 50
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 3e-08 43
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 2e-08 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gobs_1983 YP_003409049.1 XRE family transcriptional regulator VFG2175 Protein 9e-09 43
Gobs_1983 YP_003409049.1 XRE family transcriptional regulator VFG2168 Protein 9e-09 43