Gene Information

Name : Gobs_1718 (Gobs_1718)
Accession : YP_003408803.1
Strain : Geodermatophilus obscurus DSM 43160
Genome accession: NC_013757
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 1781333 - 1782094 bp
Length : 762 bp
Strand : +
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: sen:SACE_4767 short-chain dehydrogenase/reductase SDR

DNA sequence : 
ATGTCCGTCTCCGACAAGACCGCCATCGTCACCGGCGCCGGCTCCAAGCGCGGCATCGGCCGCGCCACCGCCCACACCCT
GGCCGCCGCCGGCTGGAACATCGCCATCCTCGACCTGGACGAGGGCAGCGCGAAGGACGCCGCCCAGGAGATCGCCGAGC
AGCACGGCGTCCAGGCCGTCGGCATCGGCTGCGACGTCACCGACGAGGCCTCCGTCGAGAGCGCGCTGGCCGCCCTCGAC
GGCTCGGCGCCCCCCGTGGGCGCCCTGGTGAACAACGCCGGCATCACCTCCCCGACACCGTTCCTGGAGGTCAGCGGCGA
GGAGTGGGACCGCATCTTCGCGGTCAACGTGCGCGGCGCGTACAACATCACCCGCCGCGTCGCGCCCGGCATGGCCGAGC
GCGGCTTCGGCCGCATCGTCTTCCTCTCCTCGGTCTCGGCCGAGCGCGGCGGCGGGGTGTTCGGCGGGGTCGCCTACTCC
GCCGCCAAGGCCGCCCAGCTCGGCTTCACCCGCGCACTGGCCCGGGAACTCGGGCCGAACGGCGTGACGGTCAACGCCGT
CGCCCCCGGGCTCATCGACACCGACATCACCGGCGGCGCGCTGGAGGGCGAGCGCAAGCAGGAGTTGGTCGCCGGCATCC
CGGTCGGCCGCAACGGCCGGGTCGCCGATGTCGCCGACCTCATCACGTACCTGTGCCGGGAGGAGACCGGGTACATCACC
GGCGCGACGTACGACGTCAACGGCGGCTCGCACATCCATTGA

Protein sequence : 
MSVSDKTAIVTGAGSKRGIGRATAHTLAAAGWNIAILDLDEGSAKDAAQEIAEQHGVQAVGIGCDVTDEASVESALAALD
GSAPPVGALVNNAGITSPTPFLEVSGEEWDRIFAVNVRGAYNITRRVAPGMAERGFGRIVFLSSVSAERGGGVFGGVAYS
AAKAAQLGFTRALARELGPNGVTVNAVAPGLIDTDITGGALEGERKQELVAGIPVGRNGRVADVADLITYLCREETGYIT
GATYDVNGGSHIH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 1e-46 48
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 6e-47 48
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 5e-47 48
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 4e-47 48
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 3e-49 48