Gene Information

Name : Gobs_1681 (Gobs_1681)
Accession : YP_003408768.1
Strain : Geodermatophilus obscurus DSM 43160
Genome accession: NC_013757
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 1740304 - 1741200 bp
Length : 897 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV_933 ABC transporter ATP-binding protein

DNA sequence :
ATGATCACGGTCACAGCACTCACCAAGCGATACGGGAACAGCCTCGCGGTCGACGACATGACCTTCGGGGTGGCCGCCGG
CCGCGTTACAGGCTTCGTCGGTCCCAACGGCGCCGGCAAGTCGACCACCATGCGAATGATGGTCGGGCTCACCCACCCCG
GCGCAGGGGACGTCCGCTACTCCGGCGTCCACTACCGGGACCTCAAGGACCCCGCCCGCATCGTCGGAGCCGTCCTGGAC
GCCCGCTGCATGCACCCGGGCCGCACGGCCCGGAATCACCTCCGGGCCACCGCCGCCCTCAGCGGCATCCCGTTCCGCCG
CGTCGGGGAGGTCCTCGCAGAGGTCGGGCTCGAACCGGCAGCGAACAAGCGGGCGGGCAAGTTCTCCCTCGGCATGCGTC
AGCGCCTGGCGCTGGCGTCGGCGCTCCTGGGCGAGCCGCAGGTCCTGCTGCTCGACGAACCCTCCAACGGGCTCGACCCG
GACGGCATCCGCTGGCTGCGCGACTACCTCAAGGACTTCGCCCGACGGGGCGGCACGGTGTTCGTCTCCAGCCACCTCAT
CAGCGAGCTCAGCATGTTCGCCGACGACCTCGTCGTCATCGGGGCGGGGCGTCTGCTGGCGGCGGAGTCCGTCGCCGCCA
TCACCGGGCGCAACGACGTCGGCGTGCTCGTCCGGACCCTTCAGCTGGTGGAGCTCGAGGCGCTGCTCGCCGCGCACGGA
CTCGCGGTCGAGAACGTCGTCGACCGGCTCGTGGTCCACGGGACGACCAGGGACGTCGTCTCGCAGATCGTGTTCGACAA
CAGCATCCGGCTGCTCGAGCTCAGCGAGACGTCGCGATCGCTCGAGGACAGCCTGCTCGACATGACCCGGTCATCCGCCG
AGTTCGCGAGCACGTGA

Protein sequence :
MITVTALTKRYGNSLAVDDMTFGVAAGRVTGFVGPNGAGKSTTMRMMVGLTHPGAGDVRYSGVHYRDLKDPARIVGAVLD
ARCMHPGRTARNHLRATAALSGIPFRRVGEVLAEVGLEPAANKRAGKFSLGMRQRLALASALLGEPQVLLLDEPSNGLDP
DGIRWLRDYLKDFARRGGTVFVSSHLISELSMFADDLVVIGAGRLLAAESVAAITGRNDVGVLVRTLQLVELEALLAAHG
LAVENVVDRLVVHGTTRDVVSQIVFDNSIRLLELSETSRSLEDSLLDMTRSSAEFAST

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 5e-42 44
Spaf_1095 YP_006309897.1 ABC multidrug transporter Not tested FWisland_1 Protein 2e-41 43
SSU05_0910 YP_001198276.1 transport ATP-binding protein Not tested 89K Protein 2e-36 42
SSU98_0915 YP_001200473.1 transport ATP-binding protein Not tested 89K Protein 2e-36 42