Gene Information

Name : Gobs_1080 (Gobs_1080)
Accession : YP_003408210.1
Strain : Geodermatophilus obscurus DSM 43160
Genome accession: NC_013757
Putative virulence/resistance : Unknown
Product : binding-protein-dependent transport systems inner membrane component
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0601
EC number : -
Position : 1141148 - 1142071 bp
Length : 924 bp
Strand : +
Note : PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mab:MAB_0427 peptide ABC transporter transmembrane protein

DNA sequence :
ATGGGCCGCTACGTCGCGCGCCGCCTGCTGCTCACCATCCCGGTCCTGATCGGCGCGTCGTTCCTCATCTTCGCGATGGT
GTACGCGCTGCCGGGCGACCCGATCCGGGCCCTCGGCGGGGACCGCCCGCTGGCGCCCGCGGTCGTCGCCCAGCTCCGAG
ACGAGTACAACCTCGACGATCCGCTGCTCGTCCAGTACGCGAAGTACGTCGGGGACCTGCTCCAGGGGGACTTCGGCACC
GACTTCCGTGGCCGGGATGTGCTCGACACCATCCAGCAGCGCCTGCCGGTCACCGTGCAGCTGACCGTCGTCGCGATCGC
CTTCGAGGCGGTCATCGGCATCGTCGCCGGCGTCCTGGCCGGCATCCGCCGCAACGGCTTCCTGGACAACCTGGTGCTCG
TCTCGAGCACGCTCGTCGTGTCCATCCCGATCCTGGTGCTGGCCTTCGTCGCCCAGTTCGTGTTCGGGCTCCAGTTGGGG
TGGTTCCCGGTCTCCGGCGTCGGCGACGGGTGGTACAGCTTCCTGCTGCCCGGGCTCGTGCTGGCGGCGAGCTCGTTGGC
CTACGTCGCCCGGCTGACCCGGACCAGCGTCGCGGAGAACATGCGCGCCGACTACGTCCGGACGGCCCGGGCCAAGGGGT
TGCCCAACCGCACGGTGGTCGTCCGGCACACCCTGCGCAACAGCCTGATCCCGGTGGTCACCTTCATCGGCGCCGACATC
GGCACGCTGATGGGCGGTGCGATCGTCACCGAGTCGGTCTTCAACCTGCCCGGCATCGGACGGGCCGTCTTCGACGCCGT
CCGCTCCCAGGAGGGTGCGGTGGTCGTCGGCATCGTGACGCTGCTCGTCATGTTCTTCATCTTCTTCAACCTGGTGGTCG
ACGTGCTGTACGCCGTCCTCGACCCGAGGATCCGCTATGACTGA

Protein sequence :
MGRYVARRLLLTIPVLIGASFLIFAMVYALPGDPIRALGGDRPLAPAVVAQLRDEYNLDDPLLVQYAKYVGDLLQGDFGT
DFRGRDVLDTIQQRLPVTVQLTVVAIAFEAVIGIVAGVLAGIRRNGFLDNLVLVSSTLVVSIPILVLAFVAQFVFGLQLG
WFPVSGVGDGWYSFLLPGLVLAASSLAYVARLTRTSVAENMRADYVRTARAKGLPNRTVVVRHTLRNSLIPVVTFIGADI
GTLMGGAIVTESVFNLPGIGRAVFDAVRSQEGAVVVGIVTLLVMFFIFFNLVVDVLYAVLDPRIRYD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0923 YP_005160015.1 putative peptide transport system membrane protein Not tested Not named Protein 8e-61 53