Gene Information

Name : Htur_4640 (Htur_4640)
Accession : YP_003406099.1
Strain :
Genome accession: NC_013745
Putative virulence/resistance : Resistance
Product : Cystathionine gamma-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 4.4.1.1
Position : 220340 - 221524 bp
Length : 1185 bp
Strand : -
Note : PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: afw:Anae109_3845 cystathionine gamma-lyase

DNA sequence :
ATGACACGACACAATAGCCAGTTCGACAGGAATCGATTCGCAACCATCGCAGTCGGCGCAGCTGAAACCGAAACGCATCC
TCACAGGGATGGAACGAACGATGTCGTCCCGCCGATCCACCTTTCGACTACGTTCGAGTGGGCCAGCGGGGAGGACGCCA
ATGACCACGATTATTCGCGCGAGAGCAATCCGACGCGGGCAGCCCTCGAAGAGCAGTTAGCCCGCCTCGAAGGCGGCGAG
CATGGGTTGGCGTTCGCCTCCGGAATGGCCGCTACATCGACGACGATGCTGTCGCTGGTCCCCCCGGGAGGCCACGTCGT
CTCCTCGGACTCCATCTATAGCGGGACCGAAAAACTGCTCACGGAACGCATGGCCGGACATCTCGGTGTTGACATCGACT
TTGTTGACGCCCGTGACCCCGACAACGTCGCCGATGCAGTCAACGCGGACACTGACTTGATCTGGGCAGAAACACCGTCG
AACCCCTTGATGAGGTTGTGCGATATCCAAACGATAGCCGACATCGCTGATGACCATGCTGCTCTGTTCAGCGTGGACAG
TACCTTTGCGAGTCCGTACTGCCAAGCCCCACTCGAACTGGGTGCTGACATTGTCATTCACAGCACCACCAAGTATCTCA
ACGGGCACTCCGACTCGATCGGCGGTGCCGTTATCACCGACGACAGTGACGTTTTCGAGCAATTAGCGTTCGCGCAGCGG
GTCGGGCTTGGGAATATGCTTTCGCCGTTCGACTGCTACCTCGTTACGCGAGGCATCAAGACGCTGCCCGCGCGGATGGA
ACATCACGAGCAGAACGCGATGGCAGTTGCCCGGTTCCTCGAAAGCCACGATCGGGTCGCTCGTGTCCACTATCCAGGTC
TCGAGAGCCACCCGCAACACGATCTTGCGAGTGAACAGATGTCGGGGTACAGCGGGATGCTGTCCTTCGAGTTTGATGGC
GCACTCCTCGAACTTGAGGCGTTCATCGAGGGGCTTGAGGTATTCACGCCGGGAGCTAGTCTCGGTGGGGTCGAGAGCCT
TGTTGAGGTACCGTCACTAATGATCCCCGACGAGTTCAGTCGCAGTGAGGAGTCAGCGGAGATTCCCGAGACGTTGGTCC
GGGTATCCGTTGGTCTCGAAGACGCCGATGACCTCTGCGAGGATCTCCGGACGGCGCTACCGTAG

Protein sequence :
MTRHNSQFDRNRFATIAVGAAETETHPHRDGTNDVVPPIHLSTTFEWASGEDANDHDYSRESNPTRAALEEQLARLEGGE
HGLAFASGMAATSTTMLSLVPPGGHVVSSDSIYSGTEKLLTERMAGHLGVDIDFVDARDPDNVADAVNADTDLIWAETPS
NPLMRLCDIQTIADIADDHAALFSVDSTFASPYCQAPLELGADIVIHSTTKYLNGHSDSIGGAVITDDSDVFEQLAFAQR
VGLGNMLSPFDCYLVTRGIKTLPARMEHHEQNAMAVARFLESHDRVARVHYPGLESHPQHDLASEQMSGYSGMLSFEFDG
ALLELEAFIEGLEVFTPGASLGGVESLVEVPSLMIPDEFSRSEESAEIPETLVRVSVGLEDADDLCEDLRTALP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-61 42
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-62 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Htur_4640 YP_003406099.1 Cystathionine gamma-lyase BAC0207 Protein 7e-53 41