Gene Information

Name : Htur_0305 (Htur_0305)
Accession : YP_003401879.1
Strain : Haloterrigena turkmenica DSM 5511
Genome accession: NC_013743
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 322386 - 323237 bp
Length : 852 bp
Strand : +
Note : PFAM: ABC transporter; SMC domain protein; SMART: ATPase AAA; KEGG: kpe:KPK_3972 iron-enterobactin transporter ATP-binding protein

DNA sequence : 
ATGTCACAGAACGAGTCGCAGATGACCCAAGAACGGATCACCGACGGCGACGGCGTCGCGGTCGAGAGCGCACTGGTCGG
CGAGGACCTCGCGTTGAGCTACCCGACGACCGAGGAGACGATCGTCGAGTGCGCCCGACTCGATATCCCCGAAAACGCCG
TGACCGCACTCGTCGGGCCCAACGGCAGCGGGAAGAGTACGCTGCTGAAGTCGCTCTCGAACCACCTCGAGCCCGAACGC
GGGACGGTCCGAATCCACGGCGAGGAACTCGACACGTTCAACCGGAAGGAACTGGCTCGCGAACTGGGCGTCCTCTCCCA
GGAGAACGACTCGCTGAGTTCGATCACTGTCGAGGATCTGATCTACCACGGTCGCTATCCGCATCGTGGCTTCTTCGACA
GCGTCAGCGAGGAGGATCACGCGGCCGTCGAACGCGCCCTCGAGTTGGCGGGAATCGAGGAGCTCCGGGACGCCGAACTC
GGCCAACTGAGCGGCGGTCAGAAGCAACTGGCCTGGATCGCGATGGTGCTGGCCCAGGACACGGACGTCCTCCTGCTGGA
CGAACCGACGACGTTCTTGGACGTCCACCACCAGTTCCGCGTCCTCGAGACGATCCGGCAGTTAAACGAGGAGAAGGGGG
TCACCGTAGCCGTCATCCTCCACGACATCGCTCAGGCCGCCCGCTTCGCGGATTACCTGGTCGCGATGCACGATGGGGAA
CTGTACGACTGGGGCCCGCCGGAGGAGGTCGTGACCGAGCAGTTGTTGGCCGATGTCTTCGGCGTCGAGGCGACCGTCCA
GCACGAGCCCGAACTGCAGGTATTGCCCCGTCGAGCGCTACCCGAACGCTGA

Protein sequence : 
MSQNESQMTQERITDGDGVAVESALVGEDLALSYPTTEETIVECARLDIPENAVTALVGPNGSGKSTLLKSLSNHLEPER
GTVRIHGEELDTFNRKELARELGVLSQENDSLSSITVEDLIYHGRYPHRGFFDSVSEEDHAAVERALELAGIEELRDAEL
GQLSGGQKQLAWIAMVLAQDTDVLLLDEPTTFLDVHHQFRVLETIRQLNEEKGVTVAVILHDIAQAARFADYLVAMHDGE
LYDWGPPEEVVTEQLLADVFGVEATVQHEPELQVLPRRALPER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-38 44
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-40 44
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-34 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 9e-40 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 9e-40 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 9e-40 41
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 9e-40 41
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-39 41
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-39 41
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-39 41
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 3e-39 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Htur_0305 YP_003401879.1 ABC transporter BAC0164 Protein 2e-34 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Htur_0305 YP_003401879.1 ABC transporter VFG0925 Protein 2e-44 45
Htur_0305 YP_003401879.1 ABC transporter VFG1042 Protein 2e-34 43