Gene Information

Name : Htur_2407 (Htur_2407)
Accession : YP_003403958.1
Strain : Haloterrigena turkmenica DSM 5511
Genome accession: NC_013743
Putative virulence/resistance : Resistance
Product : peptide ABC transporter permease
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1173
EC number : -
Position : 2474967 - 2475896 bp
Length : 930 bp
Strand : -
Note : PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bgl:bglu_2g13950 ABC-type dipeptide/oligopeptide/nickel transporter, permeases

DNA sequence :
ATGAGCGACCGCGAGACGCGGCGCCGCCGACCGACGCGCCGGCTGCGAGCGCTCCTCGAGCGGGGGCGACGCCTCGTTCG
GCGCCGGTTCGGCCGACGGTATCGATCGAACGGCAACATCCGGCTCGGCGGCGCCGTCGTGTGTCTCCTCGCGATCGTCG
CGATCGCCGGCCCGGCGCTGTCGCCCTACGATCCGACGGCCCAGGCGCTCGAACGCCGCCTCGCGGGGCCGTCGCTCGCC
CACCCGCTGGGCACCGACGCGCTCGGGCGCGACGTCGCGACGCGGCTGGTTTACGGCGCCCGAATCTCGCTCGCGCTGGC
GGTCGGCGCGACGCTCGTTCGCCTCGTCGTCGGGACGGCGATCGGCCTGCTCGCGGCGACCGGGAGCCGACTGGTCGACG
CCGCGTTGATGCGGCTGGTCGACGTCCAGCTCGCCTTCCCGGGGCTCGTCCTGGCGCTCGTGATCGCCGGGACGCTCGGC
CCGAGCATGCGCAACGTCGTGATCGCGCTCTCGGCCGTCGGCTGGGCCACGTACGCACGCGTCGTGCGCAGCAGCGTCCT
CGCGGTCAAGGACCGGCCGTTCGTCGAATCGGCGCGGCTCTGCGGAACGCCCCGGCGACGGATCGTCACGCGGCATCTGC
TCCCGAACGTCGCGAGCCCGGTGCTCGTCCTCGCGACGCTCAACCTCGGAACCGTCGTGCTCGCGGCGGCGGGCCTGTCC
TTCCTCGGGCTGGGCGCACAGCCCCCGACAGCGGAGTGGGGCACGATGATCGCCGACGGCCGCAACTACCTCCGGTCGGC
GCCGTGGCTCATCACTGCCCCCGGTATCGCGATCGCGGTGACCGTTATCGGCTTCAACGTGCTGGGCGACGGGCTACGAG
ACGTACTGGATCCTGATCACGTGAACGACGCGGATCGGAGGCGGACCTGA

Protein sequence :
MSDRETRRRRPTRRLRALLERGRRLVRRRFGRRYRSNGNIRLGGAVVCLLAIVAIAGPALSPYDPTAQALERRLAGPSLA
HPLGTDALGRDVATRLVYGARISLALAVGATLVRLVVGTAIGLLAATGSRLVDAALMRLVDVQLAFPGLVLALVIAGTLG
PSMRNVVIALSAVGWATYARVVRSSVLAVKDRPFVESARLCGTPRRRIVTRHLLPNVASPVLVLATLNLGTVVLAAAGLS
FLGLGAQPPTAEWGTMIADGRNYLRSAPWLITAPGIAIAVTVIGFNVLGDGLRDVLDPDHVNDADRRRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppC YP_005160016.1 putative peptide transport system membrane protein Not tested Not named Protein 8e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Htur_2407 YP_003403958.1 peptide ABC transporter permease BAC0272 Protein 2e-37 44