Gene Information

Name : Htur_1558 (Htur_1558)
Accession : YP_003403117.1
Strain : Haloterrigena turkmenica DSM 5511
Genome accession: NC_013743
Putative virulence/resistance : Virulence
Product : urease subunit alpha
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0804
EC number : 3.5.1.5
Position : 1616632 - 1618338 bp
Length : 1707 bp
Strand : -
Note : KEGG: bra:BRADO5863 urease subunit alpha; TIGRFAM: urease subunit alpha; PFAM: amidohydrolase; urease alpha-subunit domain protein

DNA sequence :
ATGAGCCGCAACCTTTCCCGCGAGGAGTACACGGAACTGTTCGGCGCGACCGAGGGCGATCGCCTCCGACTCGGCGATAC
GAACCTCTTCGCGGAGATCGAGACCGACTACGGCGTTCCCGGCGAGGAGGCCGTCTTCGGCGGCGGGAAGACGATGCGCG
ACGGGATGGGGATGCAGTCGGGAACGACCCAGGCCGAAGGGACCCTCGACTGGGCCTTTACGAACGTCGTGATAATCGAT
CCCGTGCTGGGGATTTGCAAGGGCGATATCGGCGTCCGCGACGGGAAGATCGTCGGCGTCGGGAAGGCCGGCAATCCAGA
CACCATGGACGGCGTCGACATGGTAATCGGTCCGAGCACCGATACCATCCCCGCTGACGGGTTGATCGCGACGCCCGGCG
CGCTGGACATCCACGTTCACTTCAACAGCCCGCAACTGGTCGATCACGCGCTCGGATCGGGCGTCACGACGATGCTCGGC
GGCGGCTTCGGCGGCGGTGCAACGACCTGTACGCCCGGGCCGCGGAACATCCAGCGGTTCCTGCAGGCCGCCGAAGAGTG
GCCCGTCAACGTCGGCTTCTACGCGAAGGGCAACAGCAGCCGGCCCGAGGCGCTCGTCGAGCAGATCGAGGCCGGCGCCT
GCGGCATGAAGCTCCACGAGGACTGGGGGTCGACGCCCGCCGCGATCGACACCTGCCTCGAGGTCGCCGACGAGGAGGAC
GTTCAGGTCTGCATCCACACGGACACGCTGAACGAGTCGGGCTTCGTCGAGCACACCTTCGACGCCATCGACGGGCGCGC
GATCCACACCTTCCACATCGAGGGCGCCGGCGGCGGCCACGCGCCGGACGTCCTCGAGTTGATCGGCCACGAGCACATGC
TGCCGTCGTCGACGAACCCGTCGATGCCCTACACCGAGAACACGTTTGACGAGCACCTCGACATGGTGATGGTCTGTCAC
CACCTCGATCCGGACATCCCCGAGGACGTCGCCTTCGCCGAGTCGCGCATCCGCGCGGAGACGATCGGCGCCGAGGACGT
GCTCCACGACACGGGGGCCATCTCGATGATGACCACCGACTCCCAGGCGATGGGCCGGATGGCCGAACTAATCAGTCGGA
CGTGGCAGACCGCCCACAAGATGAAGGCCCAGCGCGGCCCGCTCTCCGCCGACGAGGGGACCGACGCCGACAACGCCCGC
ATCGAACGCTACGTCGCCAAGTACACGATCAACCCCGCCATTACGGCGGGGATCGACGACTACGTCGGCTCGCTCGAGCC
CGGCAAACTCGCCGACATCGCCCTGTGGGATCCGGCCTTCTTCGGCGTCAAGCCGAAGGCCGTGATCAAGGGCGGCTTCC
CGGTCTGGTCCCAGATGGGCGAGGCCAACGGCTCGCTGATGACCTGTGAACCGGTGATCGGCCGTGAGCGCGCCGGCGCG
CAGGGCCGGGCGAAACACGGCCTCTCGGTGACGTTCGTCAGCGAGGCCGCCTACGAGAACGAGGTCGGCGACGCCTACGA
CCTGAAAACGCCCGTTCGACCCGTCACAGGCACGCGCGAGGTCTGTAAGTCCGACATGGTCCACAACGACCACTGTCCGG
ACGATATCGAGATCGACGCCCAGACGTTCGAGGTCGAAGTGGACGGCGAACACGTCACCTGCGATCCGGCCGACGAGATT
CCGCTCGCACAGCGCTACCTACTCTAA

Protein sequence :
MSRNLSREEYTELFGATEGDRLRLGDTNLFAEIETDYGVPGEEAVFGGGKTMRDGMGMQSGTTQAEGTLDWAFTNVVIID
PVLGICKGDIGVRDGKIVGVGKAGNPDTMDGVDMVIGPSTDTIPADGLIATPGALDIHVHFNSPQLVDHALGSGVTTMLG
GGFGGGATTCTPGPRNIQRFLQAAEEWPVNVGFYAKGNSSRPEALVEQIEAGACGMKLHEDWGSTPAAIDTCLEVADEED
VQVCIHTDTLNESGFVEHTFDAIDGRAIHTFHIEGAGGGHAPDVLELIGHEHMLPSSTNPSMPYTENTFDEHLDMVMVCH
HLDPDIPEDVAFAESRIRAETIGAEDVLHDTGAISMMTTDSQAMGRMAELISRTWQTAHKMKAQRGPLSADEGTDADNAR
IERYVAKYTINPAITAGIDDYVGSLEPGKLADIALWDPAFFGVKPKAVIKGGFPVWSQMGEANGSLMTCEPVIGRERAGA
QGRAKHGLSVTFVSEAAYENEVGDAYDLKTPVRPVTGTREVCKSDMVHNDHCPDDIEIDAQTFEVEVDGEHVTCDPADEI
PLAQRYLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 4e-133 57
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 4e-133 57
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 1e-137 53
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 6e-138 53
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 6e-138 53
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 6e-138 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Htur_1558 YP_003403117.1 urease subunit alpha VFG0270 Protein 9e-132 54