Gene Information

Name : Htur_1141 (Htur_1141)
Accession : YP_003402706.1
Strain : Haloterrigena turkmenica DSM 5511
Genome accession: NC_013743
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : 1.1.1.22
Position : 1193578 - 1194963 bp
Length : 1386 bp
Strand : -
Note : KEGG: dvl:Dvul_0210 UDP-glucose/GDP-mannose dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase; 6-phosphogluconat

DNA sequence :
ATGACTACGACACTGAGCGACACGAAGAACCGAGCGGACGAACGGCACAGCGAGTACGCCTTCCAGTCGGACAGCGAGGA
ACACGCCGACGAACAGTCCGGCCAGACAGCGACGATCTGCGTCGTCGGCCTCGGCTACGTCGGGCTTCCGCTCGCGGTCG
GTTTCGCGCAGTCGGACTACCGCGTTATCGGCTACGACGTCGACGAGTCGACGGTCGACCGGCTGCAGTCCGGCGTCGAT
ACGACCGGCGACCTTTCGGACGAGGCGGTTCAGAACGACGATATCTCCTACACGACCGATGCCAGCCAGATCGGTGACGC
GGATTACGTCATCATCGCCGTCCCGACGCCCATCGACGAGGACGACCGGCCGGACCTGAACTACGTCGAGAGCGCCGCGA
CCACCGTCGGCTCGAAGATGAAACCCGGGACGACGGTGATCCTCGAGTCGACTGTCTACCCGGGGACGACGCGCGAGGTT
CTCGTTCCTGCACTCGAGGACGCCTCGGATCTCACCGCGGGCGAGGGGTTCTTCGTCGGCTACTCGCCGGAGCGCGCGAC
GCCCGGCGACGAGGAACACGGTCTCGCGGACGTCGTCAAGGTCGTCGGCGCCCAGGACGAGAAGGTCCTCGAGGACGTGG
CGGCCCTCTACGAGTCGGTCGTCGACGCGGGCGTCCACCGCGCGCCGTCGATCGAGGTCGCCGAGGCCAGCAAGGTCGTC
GAGAACACCCAGCGAGACCTCAACATCGCCTTCGTTAACGAGCTCTCGATGGCCCTAGAGCGGATGGACGTCGACACCCA
GGCGGTCCTCGAGGCCGCGGGCACGAAGTGGAACTTCCACGACTATCGGCCGGGGCTGGTCGGCGGTCACTGCATTCCGG
TCGACCCGTACTTCCTGGCCCATCGATCGGCTCGCGAAGGGTTCGAGCCCGAACTCGTGCGCACGAGTCGAACGGTCAAC
GAGTCGGTCCCCGACCACGTCGCCGAGCTGACGATCAAGGCGCTGAACAACTGCCACAAGACGCTTCGAGACAGTCGCGT
CCTCGTTCTTGGACTGTCGTACAAGTCCGGCGTCGGCGACATCCGGAGCTCGAAGGTCGCGGACGTCGTCGAGCGCCTCG
CGGAGTACGATATCGACATCGCGGGCTTCGATCCGTTCGCGGACGACGAGACGGTCGAAGACGCGTTCGAACTGGACGTC
CAAGAACGCCTCTCGTTCGAGGGATTCGACGCCGTCGTGGTCGCGACACCCCACGCGGAGTTCGAGCAACTCGATCTCGA
GGCGGTAGCCTCCGAACTCGCCGAGGACCCGGCGCTGGTCGACGTGACCGGAACGTTCGACGAAGACGCGGCCTGCGAAG
CGGGGTTCGTCTACCGACGGTTATGA

Protein sequence :
MTTTLSDTKNRADERHSEYAFQSDSEEHADEQSGQTATICVVGLGYVGLPLAVGFAQSDYRVIGYDVDESTVDRLQSGVD
TTGDLSDEAVQNDDISYTTDASQIGDADYVIIAVPTPIDEDDRPDLNYVESAATTVGSKMKPGTTVILESTVYPGTTREV
LVPALEDASDLTAGEGFFVGYSPERATPGDEEHGLADVVKVVGAQDEKVLEDVAALYESVVDAGVHRAPSIEVAEASKVV
ENTQRDLNIAFVNELSMALERMDVDTQAVLEAAGTKWNFHDYRPGLVGGHCIPVDPYFLAHRSAREGFEPELVRTSRTVN
ESVPDHVAELTIKALNNCHKTLRDSRVLVLGLSYKSGVGDIRSSKVADVVERLAEYDIDIAGFDPFADDETVEDAFELDV
QERLSFEGFDAVVVATPHAEFEQLDLEAVASELAEDPALVDVTGTFDEDAACEAGFVYRRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 7e-84 47
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 6e-78 42
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 6e-78 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Htur_1141 YP_003402706.1 nucleotide sugar dehydrogenase VFG0431 Protein 3e-78 42