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Name : Acfer_0653 (Acfer_0653) Accession : YP_003398362.1 Strain : Acidaminococcus fermentans DSM 20731 Genome accession: NC_013740 Putative virulence/resistance : Unknown Product : Preprotein translocase subunit SecA Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0653 EC number : - Position : 758662 - 761139 bp Length : 2478 bp Strand : + Note : TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; helicase domain protein; SecA Wing and Scaffold; KEGG: hmo:HM1_1266 preprotein translocase, SecA subunit DNA sequence : TTGCTGGAAAACCTGATGAAACTGGTCTTTGGGGACCCCAATAAGAAAGAACTGAAGGTCTGCCAGGGCTATGTGGATAA GATCAACGCACTGGAACCGGAAATATCCGGGCTCAGTGATGCCCGTCTGTGCGCCAAGACCCAGGAATTCCGGCTGCGGC TTACCAAGGGGGAAACCCTGGATGATCTGCTGCCGGAAGCCTTTGCGGTGGTGCGGGAAGCTTCCCGCCGGGTGCTGGGG CTGCGCCATTTCGATGTACAGCTGATCGGGGGATGCATCCTCCACCGGGGCAACATTGCGGAAATGCGTACCGGTGAAGG GAAGACCCTGGTGGCCACCCTGCCGGCCTACCTGAACGCCCTGGAAGGGAAAGGGGTCCATGTGGTCACCGTCAACGACT ACCTGGCCCGCCGGGACAGCGAGGACATGGGTCGGGTCTACCGGTTCCTGGGCATGAGCGTGGGACTGATCGTCCATGAC ATGGATTTTCCGGCCCGGAAGGCAGCTTATGCGGCAGACATCACCTACGGGACCAACAATGAATTCGGGTTCGACTACCT CCGGGACAACATGGTAGTGTCTCTGGACCAGATGGTCCAGCGGCCCCTCCACTACGCCATCGTGGACGAAGTGGACTCCA TCCTGATCGATGAAGCCCGTACCCCTCTGATCATTTCCGGGCCCGGGGAAAAATCCACGGACCTGTACAACATCATGGCT GATGTGGTGAAGAACTTCAAGGAAAAAGAAGACTACACCGTGGATGAAAAACTCAAGACCGTGGCTCCCACGGAAGCGGG CATCGCCAAGGCGGAAAAACTCCTGGGCGTGAAGAACATGTACGATCCGGAAAACGGCACGGACCTGTCCCATCAGCTGA TGGAAGCCCTGAAGGCCAAGGCCCTGATGATCCGGGACCGGGACTATGTGGTGAAGGACGGGGAAGTCATCATCGTGGAC GAATTCACCGGCCGTCTCATGTATGGCCGCCGGTATTCCGAAGGGCTGCACCAGGCCATCGAAGCCAAGGAACATGTGAA GGTGGAACGGGAAAGCCAGACCCTGGCCACCATTACCTTCCAGAACTACTTCCGGATGTACGACAAACTCTCCGGCATGA CCGGTACCGCCAAGACGGAAGAACAGGAATTCCAGAAAATCTACGGGCTCAGCGTTTACGTGGTGCCCACCAACAAACCC AATATCCGGATCGACTACCCGGATGTGATCTACAAGACCAAGAAGGCCAAGTACCGGGCCGTGGTGAAGGCCATCGAGGA ACTCCATTCCGTGGGACGGCCGGTGCTGGTGGGGACCACCTCCATCGCCCAGAGCGAAGAGCTGTCCGCCATGCTGAAGA AAAAGGGCATCCAGCACAATGTGCTGAACGCCAAGTATCATGAAAAAGAAGCCGAGATCGTGGCCGATGCCGGTCAGATG GGGGCGGTGACCATTGCCACCAACATGGCCGGCCGTGGTACGGACATTACCCTGGGAGAAGGGGTGGCCGAACTGGGCGG TCTCCACATCATCGGTACGGAACGGCACGAATCCCGCCGGATCGACAACCAGCTCCGGGGCCGCTGCGCCCGGCAGGGGG ATCCGGGTTCCACCCGTTTCTACCTGTCCCTGGAAGATGATCTGATGCGGCTGTTCGGGTCTGACAACATTTCCGGCATC ATGGACAAGCTGGGAATGGACGAAGATGAACCCATCGAACACCGGCTGGTGACCCGGTCCATCGAAAATGCCCAGAAGAA AGTGGAAAGCCGGAACTTCGATATCCGGAAACACGTGCTGGAATATGACGATGTGATGAACGAACAACGGGAAGTGATCT ACGACCAGCGCCGGAAGATCCTGGAAAAGGCAGACCTGAAGGAAACGGTCCTGGGCATGGCGGACCACATTGTGGACCGG ACCATGGACATGTACGCTCCCAAGGAAGCCTACAGCGAAGACTGGGATATCCCGTCCCTGATCAAGTATGCGGAAGAATT CTATGCGCCCCAGGGCAGCCTGAAGGCGGATGAACTGGCCAATATGAGCCGGGAAGAACTGGAGGAACATCTCCACAGCC TGGCCCACAGCTATTATGATGAACGGGAAGCCGCCATCACCGCTCCCATTATGCGGGAACTGGAAAACCTGGTGATGCTG AAAGTGGTGGATACCCACTGGATGGAACACCTGGACGCCATGGATGCGCTGCGGGAAGGGATCGGTCTCCGGGCCTACGG CCAGCGGGATCCTCTGGTGGAATACAAGTTCGAAGCCTACGATATGTTCGAAGGCATGAAGGAAGCCATTGTGGACGATG TGGTCCGGTACATGTACCGGGTGAACGTGGTGACCCAGCCCACGGTGGAAGACCACCTGTCCAACGCTTCCGTGAACAAC CCCAATGTGGACGGCACTGCGGAAGGAGCCCAGGCTCCGGCGGAAGTCCACGGACCGGAAGGGGCTCCCCGGAAATAA Protein sequence : MLENLMKLVFGDPNKKELKVCQGYVDKINALEPEISGLSDARLCAKTQEFRLRLTKGETLDDLLPEAFAVVREASRRVLG LRHFDVQLIGGCILHRGNIAEMRTGEGKTLVATLPAYLNALEGKGVHVVTVNDYLARRDSEDMGRVYRFLGMSVGLIVHD MDFPARKAAYAADITYGTNNEFGFDYLRDNMVVSLDQMVQRPLHYAIVDEVDSILIDEARTPLIISGPGEKSTDLYNIMA DVVKNFKEKEDYTVDEKLKTVAPTEAGIAKAEKLLGVKNMYDPENGTDLSHQLMEALKAKALMIRDRDYVVKDGEVIIVD EFTGRLMYGRRYSEGLHQAIEAKEHVKVERESQTLATITFQNYFRMYDKLSGMTGTAKTEEQEFQKIYGLSVYVVPTNKP NIRIDYPDVIYKTKKAKYRAVVKAIEELHSVGRPVLVGTTSIAQSEELSAMLKKKGIQHNVLNAKYHEKEAEIVADAGQM GAVTIATNMAGRGTDITLGEGVAELGGLHIIGTERHESRRIDNQLRGRCARQGDPGSTRFYLSLEDDLMRLFGSDNISGI MDKLGMDEDEPIEHRLVTRSIENAQKKVESRNFDIRKHVLEYDDVMNEQREVIYDQRRKILEKADLKETVLGMADHIVDR TMDMYAPKEAYSEDWDIPSLIKYAEEFYAPQGSLKADELANMSREELEEHLHSLAHSYYDEREAAITAPIMRELENLVML KVVDTHWMEHLDAMDALREGIGLRAYGQRDPLVEYKFEAYDMFEGMKEAIVDDVVRYMYRVNVVTQPTVEDHLSNASVNN PNVDGTAEGAQAPAEVHGPEGAPRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secA2 | YP_006310687.1 | preprotein translocase subunit SecA2 | Not tested | FWisland_3 | Protein | 1e-124 | 41 |
