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Name : Acfer_0511 (Acfer_0511) Accession : YP_003398229.1 Strain : Acidaminococcus fermentans DSM 20731 Genome accession: NC_013740 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 600542 - 601780 bp Length : 1239 bp Strand : + Note : PFAM: type II secretion system protein E; KEGG: dac:Daci_1299 general secretory pathway protein E DNA sequence : ATGTTTGGGCATTCCTGCGGGATAGAAAGGGACGTCGGACCATTCCGGTGGAAGGATCCTCTGGAAAGAAGGGTAGGGAG CGGTCCTGTGTCCCCGGCGGTGCTCCTGGCCCGGGAAGTGGTGGAACAGGCTTTGGAACAGGGGGCCAGTGACATCCATC TGGAACCGGAAACGGACGGGATGGTGATCCGCTGCCGGCTGGACGGCGTGCTTCAGAAGCTCCGGACCGTGCCGAAAAAT CTCCAGGACCCGCTGGTTTCCCGGTTTAAGATTCTTTCCGGCATGGACATCGGAGAAAAACGGCTGCCCCAGGACGGACG GTTCCAGGAAGCCTGGCAGGACCGGCAGGTGGACGTGAGGGTTTCCTCCCTGCCCACCCTCCATGGGGAAAGTCTGGTGC TGCGGCTCCTGGACCAGGAGAACGTCGCCCTGGATCTCTCCCGGCTGGGATTCAGCCACCACAACCGGGCACGGCTGGAC CGGTGTCTGCAGAAACCCCATGGATTGTTCCTGGTCACCGGTCCCACCGGCAGCGGAAAATCCACTACCCTGTACGGGGC TCTGGCCGCCCTGGACCGGGACCATCAGAAAATCATTACCGTGGAAGACCCGGTGGAGTATCAGCTGCCGGGAATCCGCC AGGTGGCCGTCCGGCCCAAAATCGGCCTGACCTTCAGCCGCTGTCTCCGAAGTATCCTGCGCCAGGATCCGGACTGCATC CTGATTGGGGAAATCCGGGACGGGGAAACCGCCGCCATGGCCATCCAGGCGGCGCTTACCGGGCACCGGGTCCTGAGCAC CCTTCACACCAACACCGCAGCCGGAGCGGTGAACCGGATCCTGGACATGGGGGTGGAACCCTATCTGGCAGCCTCTGCCC TCCAGGGGGTGGCCGGGCAGCTTCTGGTCCGAAGACTGTGCAGCCACTGCAAAAAGGCGTATACTGTACAGGAGCAGGCT TGGGAATGGAGCTATCTGGGGCTGCAGGAACCCCGGACGCTGTACAGGGCCCAGGGCTGTCCCCGCTGCCGGCATACCGG GTATGGGGGACGGCTGCCCCTGCAGGAGGTACTGCTTGTGGAAGGATCCGTCCGCCAGGGAATCCTGGACGGGTGGCATG AAGAAGCACTGGAAAAAGAAGCCCGGAAGACCGGATTCCGGTCCCTCCGGGATGACGGACGGGAGAAGGTGCTGGCCGGA GAGACCAGTGCGGAGGAACTGCTCCGGGTATTGGGATAA Protein sequence : MFGHSCGIERDVGPFRWKDPLERRVGSGPVSPAVLLAREVVEQALEQGASDIHLEPETDGMVIRCRLDGVLQKLRTVPKN LQDPLVSRFKILSGMDIGEKRLPQDGRFQEAWQDRQVDVRVSSLPTLHGESLVLRLLDQENVALDLSRLGFSHHNRARLD RCLQKPHGLFLVTGPTGSGKSTTLYGALAALDRDHQKIITVEDPVEYQLPGIRQVAVRPKIGLTFSRCLRSILRQDPDCI LIGEIRDGETAAMAIQAALTGHRVLSTLHTNTAAGAVNRILDMGVEPYLAASALQGVAGQLLVRRLCSHCKKAYTVQEQA WEWSYLGLQEPRTLYRAQGCPRCRHTGYGGRLPLQEVLLVEGSVRQGILDGWHEEALEKEARKTGFRSLRDDGREKVLAG ETSAEELLRVLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-84 | 50 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-84 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Acfer_0511 | YP_003398229.1 | type II secretion system protein E | VFG2048 | Protein | 4e-86 | 50 |
| Acfer_0511 | YP_003398229.1 | type II secretion system protein E | VFG0182 | Protein | 4e-84 | 49 |
| Acfer_0511 | YP_003398229.1 | type II secretion system protein E | VFG2426 | Protein | 2e-66 | 46 |
| Acfer_0511 | YP_003398229.1 | type II secretion system protein E | VFG1876 | Protein | 3e-77 | 46 |
| Acfer_0511 | YP_003398229.1 | type II secretion system protein E | VFG0233 | Protein | 7e-68 | 44 |
