Gene Information

Name : Acfer_0499 (Acfer_0499)
Accession : YP_003398217.1
Strain : Acidaminococcus fermentans DSM 20731
Genome accession: NC_013740
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 586841 - 588007 bp
Length : 1167 bp
Strand : +
Note : KEGG: sbo:SBO_0857 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase

DNA sequence : 
ATGAAAATCGCGATTGCAGGCACTGGCTATGTGGGCCTTTCCAACGGGCTCCTGCTGGCCCAGCACCAGGAAGTGGTGGC
GCTGGACATTGTGCCGGAAAAAGTAAAAATGCTCAACGAAGGCCGGTCCCCTCTGGTGGATGCGGATATTTCCCAGTTCC
TGAAACGGACGGACATCCGGTTCCGGGCTACCCTGGATCCCCGGGACGCCTTTGCAGGAGCTTCCTATATCATCATTTCC
ACCCCCACCAACTATGATCCCCAGAAGAACTTCTTTGACACCTCTTCTGTGGAAAAGGTCATCGAGGAAGTGCTGGCCAT
CAACCCGGCAGCAGTGATGGTGATCAAATCCACGGTACCGGTGGGGTATACGGAAGAAATCCGGGAGCGCTACCACACGG
ACAATATCCTTTTCTCTCCGGAATTTCTCCGGGAAGGGAAGGCCCTGTATGACAATCTCCATCCGACCCGGATTGTGGTG
GGGGAAGATTCTCCCCGGGCCCGGGAATTTGCGGCTCTTTTGGCGGAAGGGGCGGAAAAGGAGGATATTCCTCAGCTGTT
CACCGGTTCCACGGAAGCGGAAGCCATCAAGCTGTTTGCCAACACCTATCTGGCTCTGCGGGTGGCCTATTTCAACGAAC
TGGATTCCTATGCGGAAATGCGGGGACTGTCCACGTTCCAGATTATCCGGGGGGTCTGCCTGGATCCCCGGATCGGGGAT
TTCTACAATAACCCTTCTTTTGGATACGGTGGATACTGCCTGCCCAAGGACACCAAACAGCTGCTGGCCAATTACCAGGA
CGTGCCCCAGAATCTGATTTCCGCCATTGTGGCGGCCAACCGGACCCGGAAGGACCACATCGCTGATGAGATCCTGGCCC
GGAAGCCCAAAACCGTGGGTATCTACCGGCTGACCATGAAAAGCGCGTCGGACAATTTCCGTTCTTCCGCCATCCAGGGC
GTGATGAAACGGATCAAGGCCAAGGGCATCCCGGTGGTGGTCTATGAACCCACCCTGCAGGAACCGGAATTTTTCCGGTC
CCCCGTATGCCGGGATCTGGACCGGTTCAAAAAGGAATGCGACCTGATCGTGGCCAACCGCTGGTCCCAGGACCTGGCAG
ACGTGAAGGAAAAAGTCTATACCCGGGATCTGTTTGACCGGGACTAA

Protein sequence : 
MKIAIAGTGYVGLSNGLLLAQHQEVVALDIVPEKVKMLNEGRSPLVDADISQFLKRTDIRFRATLDPRDAFAGASYIIIS
TPTNYDPQKNFFDTSSVEKVIEEVLAINPAAVMVIKSTVPVGYTEEIRERYHTDNILFSPEFLREGKALYDNLHPTRIVV
GEDSPRAREFAALLAEGAEKEDIPQLFTGSTEAEAIKLFANTYLALRVAYFNELDSYAEMRGLSTFQIIRGVCLDPRIGD
FYNNPSFGYGGYCLPKDTKQLLANYQDVPQNLISAIVAANRTRKDHIADEILARKPKTVGIYRLTMKSASDNFRSSAIQG
VMKRIKAKGIPVVVYEPTLQEPEFFRSPVCRDLDRFKKECDLIVANRWSQDLADVKEKVYTRDLFDRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 3e-88 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acfer_0499 YP_003398217.1 nucleotide sugar dehydrogenase VFG0963 Protein 2e-101 55