|
Name : Acfer_0461 (Acfer_0461) Accession : YP_003398179.1 Strain : Acidaminococcus fermentans DSM 20731 Genome accession: NC_013740 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.3 Position : 545024 - 547012 bp Length : 1989 bp Strand : + Note : KEGG: pmx:PERMA_1704 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region DNA sequence : ATGCAAAATATTGATACTGAAAGCATCAACACCCTGCGTTTTTTGTCCATCGATGAGGTGCAGGCGGCCAATTCCGGCCA CCCGGGACTGCCTCTGGGAACCGCACCCCTGATGTACACCATCTGGGACCGGTTCATGAAATACAATCCTGAAAACCCCA ACTGGTTCGACCGGGACCGGTTCGTCCTGTCTCCGGGCCACGGCAGTGCCCTGCTTTATGCCATGCTCCATCTGGCCGGC TATGACCTGTCCCTGGAAGACCTGAAGAACTTCCGTCAGTGGGGCAGCAAGACTCCGGGCCATCCGGAATACGGCGTGAC CCCCGGGGTGGATGTGTCCACGGGTCCTCTGGGCCACGGCTTTGCCATGGCTGTGGGTCTGGCCATGGCGGAAGAAATGA TGGCTGCCCGGTACAACAGAGATGGGTACAAAGTGGTGGACCATTACACCTACGGCATCACCTCCGACGGGGACCAGATG GAAGGGGTGGCTTCCGAAGCCGCTTCCCTGGCAGGGACCCTGGGGCTGGGCAAACTGATCTTCCTGTATGATGACAACAA GATCACCATTGAAGGCGGCACGGACATCGCTTTCCGGGAAGATGTGGGAGCCCGGTTCAAAGCCTATGGCTGGCAGGTCC TGCGGGTGGCTTCTTCGGAAGATGTGGAAGCCCTGACCAAAGCCATCGAAGCCGCCAAAAAGGAAACGAAGAAACCGTCC CTGATCATCGTGAAGACCCATATCGGGTTCGGCAGTCCCCGGCAGGACATGGCCAGTGCCCACGGGGAACCCCTGGGTGC GGAAAACGTGGCAAAGACCAAGGAAGCCGCCGGCTGGGACGGCAGCCAGTCCTTTGTGGTACCGGAAGAAGTGAAGGCCC ATTTCGACGCCAAACTGCCCCAGTGCCGGAAAAATGAAGAAGACTGGAACAAACTGGTGGAAGCCTACAGCAAAGCCTAT CCGGAACTGGCCCAGGAACTGACCGACCGGCTGGACGGGAAAATGGACCTGGATCTGAAGGAACTGATGGGTGCCTTCAA GGATACGGACAGTGTGGCCACCCGGGCCGCTTCCGGCACGGTGCTCCAGCTGCTGGCGGACCGGATCCCGGCCCTTACCG GCGGCAGCGCCGACCTGGGGCCTTCCAACAAAACGGAAATGAAGGGCAAGGGGTTCTTCTCTGCAGAAGACCGGACCGGC CGGAACATCCACTTCGGCATCCGGGAACATGCCATGGGCTGTATCGTCAACGGCCTGTGTCTCCATGGAGGCATCCTGCC TTTCGGCGCCACTTTCCTGGTGTTTGCTGACTTCATGCGTCCCACGGTGCGGATGGCGGCGCTGATGGGCATCGGCAGCG TGTTCGTCTATACCCATGACAGTGTGTTCGTAGGGGAAGACGGTCCTACCCATGAACCCATTGAACAGACCATGAGCCTG CGGCTGATCCCCAATGTGTCCGTATTCCGTCCGGCGGACGCCCTGGAAACGGCTGTGGCCTGGAAAGCCGCCTGCGAAAA CCGGAAGCAGCCCACTTGCCTGCTGCTGACCCGTCAGGGGCTGCCGGTGCTCCATGACTATGCCAAGACCATTGCCAAGG GAGCACCCAAAGGAGCCTATGTGCTGAGCCCGTCTTCCAAAGACAAGGTGAAGGCCGTCCTCCTTGCCACCGGCAGTGAA GTCCACCTGGCCCTGGATGCCCAGAAGGCCCTGGAAGAAAAGGGCATCGGTGTCAATGTGGTGTCCATGCCCAGCTGGGA TGTGTTCGAACAGCAGAGCAGCGCCTACAAGAAGAAAGTCCTGCCCAAGGATGTTCTGGCCATTGCACTGGAAGCCGGTG TCCGCACCGGCTGGGCCCGGTATACCGGCAGTGAGGACAGAGTCCTGGGCATCGACCGGTTCGGTGCTTCCGCCCCCGGC AAGACAGTGTACAAAGAATTCGGATTCACCGTGGACCATGTGGTGGATATGGTGAAGAAACTGAAGTAA Protein sequence : MQNIDTESINTLRFLSIDEVQAANSGHPGLPLGTAPLMYTIWDRFMKYNPENPNWFDRDRFVLSPGHGSALLYAMLHLAG YDLSLEDLKNFRQWGSKTPGHPEYGVTPGVDVSTGPLGHGFAMAVGLAMAEEMMAARYNRDGYKVVDHYTYGITSDGDQM EGVASEAASLAGTLGLGKLIFLYDDNKITIEGGTDIAFREDVGARFKAYGWQVLRVASSEDVEALTKAIEAAKKETKKPS LIIVKTHIGFGSPRQDMASAHGEPLGAENVAKTKEAAGWDGSQSFVVPEEVKAHFDAKLPQCRKNEEDWNKLVEAYSKAY PELAQELTDRLDGKMDLDLKELMGAFKDTDSVATRAASGTVLQLLADRIPALTGGSADLGPSNKTEMKGKGFFSAEDRTG RNIHFGIREHAMGCIVNGLCLHGGILPFGATFLVFADFMRPTVRMAALMGIGSVFVYTHDSVFVGEDGPTHEPIEQTMSL RLIPNVSVFRPADALETAVAWKAACENRKQPTCLLLTRQGLPVLHDYAKTIAKGAPKGAYVLSPSSKDKVKAVLLATGSE VHLALDAQKALEEKGIGVNVVSMPSWDVFEQQSSAYKKKVLPKDVLAIALEAGVRTGWARYTGSEDRVLGIDRFGASAPG KTVYKEFGFTVDHVVDMVKKLK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 8e-138 | 49 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 2e-134 | 47 |
