|
Name : Acfer_0044 (Acfer_0044) Accession : YP_003397768.1 Strain : Acidaminococcus fermentans DSM 20731 Genome accession: NC_013740 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 53236 - 54567 bp Length : 1332 bp Strand : + Note : KEGG: hmo:HM1_0975 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase DNA sequence : TTGGAAGAACGTATCCCACCCCAGAATATCGAGGCGGAACAAAGTGTGCTGGGAGCCATGCTGATCAGCCGGGAAGCCAT CGACAAGGCGGGAGAAATCCTCAATGAGGATGATTTTTACCGTCCGGACGACCGGACCATCTTTTCGGCCATTATGGATC TCCACAGCCGCAATGAGGCGGTGGACCTGGTCACCGTCACGGAAGAGCTGCGGAGGCTGGGAAAACTGGATGCCATCGGG GGCACAGCGGCCATTACGGCCCTGAGCAATGCGGTGCCCACGGCAGCCAATGTGGTGTACCATGCCAAGATTGTGGAGGA AAAATCTCTCCGCCGGCAGCTGATCAATTCCGCAACGGAAGTGGCGGCCAGCGGCTATGAGGAAGACCAGGACATTGCCC AGACCATCGACCAGGCGGAACAGAAAATCCTGGCGGTGGCCAACCGGAAACATTCCGGGGGCGTGGTGAAGATCAAGGAC ATTGTGAAAAGCGCCATGGCCCGGATCGAAGAGCTGTATGACACTAAGGATGCCTTCACCGGTCTGCCCACCGGGTTTAC GGATTTCGACAAGATGACCAGCGGTCTCCAGCCTTCGGATCTGATCATCGTGGCGGCCCGTCCTTCCATGGGGAAATCCT CCCTGGTGCTGAATATTGCGGAACATGTGGCGTTGGATGGGGGCAAATCCGTGGCCTTCTTTTCCCTGGAAATGAGCAAG GAGCAGCTGGTCCAGCGGCTTCTGTGCTCCCAGGCCCGGATCGACGCCTCCCGGCTGCGGATCGGCCAGCTCCAGGAAAG CGAATGGCCCAACCTGGTCAGTGCGGCGGACAAGCTCAGTGCCGCCAAGATCATGTTGGACGATACCCCGGGGATGACGG CACTGGAAATGCGGTCCAAGGCCCGGCGGTGGAAAAATGAAAACGGCCTGGATCTGATCATCGTGGACTATCTGCAGCTG ATGCAGGGATCTTCCAAACGGGCCAGCGACAACCGGCAGCAGGAAATGAGTGACATCTCCCGGTCCCTGAAGGGACTGGC CCGGGAACTGAATGTGCCGGTGATCGCCCTGTCCCAGCTGAGCCGGAGCGTGGAACAGCGGACCAGCAAACGGCCCATGC TCAGTGACCTGCGGGAATCCGGGGCCCTGGAACAGGATGCGGATATCGTTTGCTTCATCTACCGGGACGATTATTACAAC CAGGATACGGAACAGAAGAATGTGGCGGAACTGATCGTGGCCAAGCACCGGAATGGTCCGGTGGGCACGGTGCCGCTGTA TTTCCGGAAAGACATTACCCGGTTCGAGGACCTGAGCCGGCGGCCGGAATGA Protein sequence : MEERIPPQNIEAEQSVLGAMLISREAIDKAGEILNEDDFYRPDDRTIFSAIMDLHSRNEAVDLVTVTEELRRLGKLDAIG GTAAITALSNAVPTAANVVYHAKIVEEKSLRRQLINSATEVAASGYEEDQDIAQTIDQAEQKILAVANRKHSGGVVKIKD IVKSAMARIEELYDTKDAFTGLPTGFTDFDKMTSGLQPSDLIIVAARPSMGKSSLVLNIAEHVALDGGKSVAFFSLEMSK EQLVQRLLCSQARIDASRLRIGQLQESEWPNLVSAADKLSAAKIMLDDTPGMTALEMRSKARRWKNENGLDLIIVDYLQL MQGSSKRASDNRQQEMSDISRSLKGLARELNVPVIALSQLSRSVEQRTSKRPMLSDLRESGALEQDADIVCFIYRDDYYN QDTEQKNVAELIVAKHRNGPVGTVPLYFRKDITRFEDLSRRPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 3e-79 | 41 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 4e-71 | 41 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 4e-71 | 41 |
