|
Name : Acfer_2044 (Acfer_2044) Accession : YP_003399704.1 Strain : Acidaminococcus fermentans DSM 20731 Genome accession: NC_013740 Putative virulence/resistance : Unknown Product : Tex-like protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 2273235 - 2275409 bp Length : 2175 bp Strand : - Note : PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: sth:STH2928 ribosomal protein S1-like protein DNA sequence : ATGAAACAAACTGACATCGCCCCGCGCATTGCCCGGGAACTGTCCGTCCAGCCCTGGCAGGTGGAAAAGACCGTGGAACT CCTGGATGGGGGCAACACCGTCCCCTTTATCGCCCGTTACCGGAAAGAAGTCACCGGCTCCCTGCTGGATGAGCAGATCC GGACCATCGAAGAACGGCTGGGCACCCTCCGGAACCTGGTGAAGCGCCAGGAAGAGATCCTGGCCAAAATCGACGAACAG GGAAAACTGACCCCGGACCTGCGGAAAGCCATTGAAAATGCCCAGAAACTGACAGAACTGGAAGATTATTATCTGCCTTA CAAGCAAAAACGGCGTACCCGTGCCCAACAGGCTCGGGAAAAAGGCCTGGAACCCCTGGCTACCGCCTTCCTCCTCCAGC GGGACCAGAAGGGAGATGCCCTGACCGCCGCCCGGGCCTATGTGGATCCGGACAAAGGGGTGGAGACCCCGGAAGACGCC CTGGCCGGCGCACGGGACATTGTGGCGGAACTGGCGGCGGAAGATCCCACCCTGCGCCAGACCCTCCGGGAACAGCTGTG GAACCACGGTTTCCTCCAGACCGAACTGGTGGAAGATGCGGAAGAGGCCCAGACCTTCCTGATGTACGCCGATTACCGGG AACCGGTCCGGACCCTGCCTTCCCACCGGGTACTGGCCATCAACCGGGGCGAAAAGAAAGGCTGTCTGAAAGTCCATCTG GTGTGGGATGAACAGCAGGCCCTCCGGAAAATGGAATGGCGGGTGCTCCGCCGGCCCTGCATCTACCGGGACCAGTTGAA GGAAGCCCTGGCGGACAGCTGGAAACGGCTGCTGTTCCCGGCCCTGGAACGGGAAATCCGCAGCAGGCTGACGGAACAGG CGGAAGACCAGGCCATCAAGGTGTTCGGGGCCAACCTGGGACAGCTGCTGCTCCAGGCTCCCCTGGCCGGCCATACGGTT ATGGGGCTGGATCCGGGCTACCGGACCGGCTGCAAGGTGGCGGTGGTGGATCCCACCGGCCAGGTGCTGGACCACGGGGT GATCCAGGTGACACAGAGCGAAGGCCAGAAGAAAAAGGCCGAGGCCCTGCTCCTGTCCATGATCCAAAAGCACCATGTAA CCCTGCTGTCCATCGGCAACGGCACTGCTTCCTATGAGACAGAGCAGTTTGCCGCCCGGCTGATCCAGGAACACCAGCTG AAGGACGTCCATTATCTCATTACCAATGAAGCCGGGGCTTCCGTCTATTCCGCCTCCAAACTGGCTCAGGAGGAACTGCC GGAATACGATGTGACCATCCGGGGTGCCGTATCCATGGCCCGGCGGGTCCAGGATCCTCTGGCGGAACTGGTGAAGATCG ATCCCCAGGCCATCGGGGTGGGCCAGTACCAGCACGATGTGGACCAGAAAGCCCTGGCCGGCACCCTGGACGGGGTGGTG GAACGGGTGGTGAACCATGTGGGAGTGGACCTGAACACCGCGTCTCCCGCCCTGCTCCGCCATGTGGCCGGGATCACTGC CGCCACCGCCGGCAACATTGTGGCCTGGCGGAACGCCAACGGCCGGTTCACCGGACGGCGGCAGCTGCTGAAGGTGCCCC GGCTGGGCCCGGCTGCCTTTACCCAGTGCGCCGGGTTCCTGCGGATCCACGGGGGCAAGTCTCCTCTGGATGACACCCCC GTCCATCCGGAATCCTACGCCCTGGCCCAGCAGATCCTGGAAAAGCTGGGCTTTGCCCTGGAAGACCTGCAGGACAAAGA AAAACTGGCACGGCTGGCCGCCCGGCGGAAACAGGTGGATGAAGCCCGGATGGCCCGGGAACTGGAGGCCGGGGAACCCA CCGTCCACGACATCCTGGATGCCCTGGTGGCTCCCGGCCGGGATCCCCGGTCCGATCTTCCGGCCCCTCTGACCCGCCAG AACATCGTGAAACTGTCGGACATCAAAGTGGGGACCATCCTCCGGGGCACCATCCGGAATGTCACCGATTTCGGCGCCTT CGTGGACATCGGCATCAAAACCGCCGGCCTCATCCACATTTCCCACATGAGCCAGAAACGGATCAAACATCCCCTGGATG TGGTCAGCGCCGGAGAAACGGTCCAGGTCAAGGTGATCAGCGTGGATGAGGGGAGGGGGAGGATTGGGCTTGCTCTGGTA ACGGCTGACGCATAA Protein sequence : MKQTDIAPRIARELSVQPWQVEKTVELLDGGNTVPFIARYRKEVTGSLLDEQIRTIEERLGTLRNLVKRQEEILAKIDEQ GKLTPDLRKAIENAQKLTELEDYYLPYKQKRRTRAQQAREKGLEPLATAFLLQRDQKGDALTAARAYVDPDKGVETPEDA LAGARDIVAELAAEDPTLRQTLREQLWNHGFLQTELVEDAEEAQTFLMYADYREPVRTLPSHRVLAINRGEKKGCLKVHL VWDEQQALRKMEWRVLRRPCIYRDQLKEALADSWKRLLFPALEREIRSRLTEQAEDQAIKVFGANLGQLLLQAPLAGHTV MGLDPGYRTGCKVAVVDPTGQVLDHGVIQVTQSEGQKKKAEALLLSMIQKHHVTLLSIGNGTASYETEQFAARLIQEHQL KDVHYLITNEAGASVYSASKLAQEELPEYDVTIRGAVSMARRVQDPLAELVKIDPQAIGVGQYQHDVDQKALAGTLDGVV ERVVNHVGVDLNTASPALLRHVAGITAATAGNIVAWRNANGRFTGRRQLLKVPRLGPAAFTQCAGFLRIHGGKSPLDDTP VHPESYALAQQILEKLGFALEDLQDKEKLARLAARRKQVDEARMARELEAGEPTVHDILDALVAPGRDPRSDLPAPLTRQ NIVKLSDIKVGTILRGTIRNVTDFGAFVDIGIKTAGLIHISHMSQKRIKHPLDVVSAGETVQVKVISVDEGRGRIGLALV TADA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 2e-133 | 48 |
