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Name : Acfer_1961 (Acfer_1961) Accession : YP_003399627.1 Strain : Acidaminococcus fermentans DSM 20731 Genome accession: NC_013740 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2165865 - 2168408 bp Length : 2544 bp Strand : - Note : KEGG: dae:Dtox_2007 ATP-dependent chaperone ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase- like; SMART: AAA ATPase DNA sequence : ATGCAGGCAGAACGCTTGAGTGATGAAGTGCGTGGATTGTTGGAAGCTGCCCAGCAGCAAGCCGTTATGAATTACAACCA GGAACTGACCACCGTCCATCTGCTGTCCGCCATGTGCAGCCAGCCGGACGGGTTCTTCAAGTTTGTGCTGAAGAGCCTGA ACGTGGATGAGGCCCAGTTCAGCCGGGAAGTGGACCGGCTGCTGAAACAGATCCCCTCTGTGAAGGGGTCCGACCAGATG AGCATGAGCACGGGGCTGGCCCGGGTGTTCGCCCTGGCGGAAAAGGCTGCCGGCCAGAACCCGGTGACCGCATCCCATCT GCTGGCCGCTCTCTGTGAGGACGGGGATACGGAAGTGGTGAACCTGTGCAAAAAGTACGGGATCACCCGCAGTGCCATCC GGGGTCTGATCGACAAATATGAAAACAACGGGGATGCGGACGAAAACCGCAAGACCCTGGAGAAATTCGGCCAGGACCTG ACCCAGAAAGCCCGGGATGGGAAACTGGATCCGGTGATTGGCCGTGACGATGAAATCCGTCGGACCATCGAGATCCTGTC CCGCCGGAAAAAGAACAACCCGGTGCTGATCGGTGAACCCGGCGTGGGCAAAACCGCCATTGTGGAAGGTCTTGCCCGCC GTATCGTGGCCGGAGATGTGCCGGAATCCCTGAAGAACAAGACCCTGTATGCCCTGGACCTGGCGTCTTTGGTGGCCGGG GCCAAGTACAGAGGGGAATTCGAGGAACGGCTGAAGAAAGTCCTGAAGATCGTGTCCGATTCCGCCGGTCAGATCATCAT GTTCATCGATGAACTGCACACGGTGGTGGGGGCCGGGGCTTCCGAAGGCTCCATGGATGCCGGGAACATCCTGAAACCCA TGCTGGCCAGAGGGGAACTCCGGTGCATCGGTGCCACCACCCTGAAGGAATACCGGAAGTACATTGAAAAGGATTCTGCT CTGGAACGGCGTTTCCAGCCGGTGCTGGTGAAGGAGCCCAGTGTGGAGGACACCATTTCCATCCTGAGAGGGCTGAAGGA ACGGTATGAAGTCCATCATGGGGTGCGGATCAAGGATTCCGCCCTGGTGGCGGCCGCAACCCTGAGCAACCGGTACATCA ACGACCGGTTCCTGCCGGACAAGGCCATCGACCTGGTGGATGAAGCAGCTGCCCGTCTGCGGGTGGAAATCGATTCCATG CCCACGGAACTGGATGAAAGCCGCCGGCGGATGCTCCAGCTCCAGATCGAGGAACAGGCCCTGTCCAAGGAAGAGGACGA TGCTTCCAAGGCCCGTCTGGAAAAAATCAAAGAGGAACTGGCCAAGCTGAAGAGCGAGAACGACAAGCTCATGGACCAGT GGAAGGCCGAAAAGGGCGGCATTGCCAAGATCCGTCAGGTGAAGAAGGATATGGACAATGTGAAGAAGGAAATGGAAGAA GCGGAGCGGTCCTATGACCTGAACCGTCTGGCAGAACTGAAGTACGGCAAGTTGCCGGAACTCCAGAAACAGCTGGCGGC CCTGGAAAAAGAGGAACATTCCGACAAGCGCCTGCTGAAGGAAGAAGTGGACGAGGATGATATCGCCAAGGTGGTCAGCA CCTGGACGGGGATCCCTGTGAACCGTCTGATGGAGGGGGAAAAGAAGAAACTGGCCCATCTGCCGGAAATCCTCCACAAA CGGGTGATCGGCCAGGACGAAGCGGTGGAAGCCGTCAGCGAAGCCGTCATCCGGGCCCGGGCCGGGATCAAGGATCCCAA CAAGCCCATTGGCTCCTTCATCTTCCTGGGGCCCACCGGTGTGGGCAAGACCGAACTGGCCAAAGCCCTGGCAGAAGTGC TGTTCAATGATGAAAAGAGCATCATCCGGATCGATATGAGTGAATACATGGAGAAACATACGGTGTCCCGTCTGATCGGT GCCCCTCCTGGCTATGTGGGCTATGAAGAGGGCGGCCAGCTGACGGAAGCCGTGCGGCGCCATCCGTATTCCGTGATCCT GTTCGATGAAATCGAAAAGGCTCACCCGGATGTGTTCAACGTGCTGCTGCAGGTGCTGGACGACGGCCGTCTGACCGACG GTCAGGGCCGGATGGTGGATTTCAAGAACACCCTGATCATCATGACCAGCAACCTGGGGTCCCATGAGATTATGGAAAAG AAGGGGGCCATCAGCAAGGACGAAGTCCGGAGCATGCTGATGAAGTTCTTCCGGCCGGAATTCCTGAACCGGGTGGACGA CATTGTGGTGTTCAAACCCCTGCAGGAAGAACAGCTGAAGGACATTGTACGGCTGATTCTGAACCATCTGGGCAGCCGGC TGCACAGCCAGCTGGAACTGACCCTGACGGCCACCGACGACGCCATTGCCTACCTGGCCAAAGCCGGGTTCGACCCTGCC TTCGGGGCCCGTCCCCTGAAGAGACTGATTGTCCACACAGTGGAAACCGTGGTGAGCAACAAGATCGTCCGGGGCGAGAT CCAGAGAGGGGATCATATCGAAGTGGTATTCAAGGACGGGAACATCGATGTGGTGAAGAAATAA Protein sequence : MQAERLSDEVRGLLEAAQQQAVMNYNQELTTVHLLSAMCSQPDGFFKFVLKSLNVDEAQFSREVDRLLKQIPSVKGSDQM SMSTGLARVFALAEKAAGQNPVTASHLLAALCEDGDTEVVNLCKKYGITRSAIRGLIDKYENNGDADENRKTLEKFGQDL TQKARDGKLDPVIGRDDEIRRTIEILSRRKKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLKNKTLYALDLASLVAG AKYRGEFEERLKKVLKIVSDSAGQIIMFIDELHTVVGAGASEGSMDAGNILKPMLARGELRCIGATTLKEYRKYIEKDSA LERRFQPVLVKEPSVEDTISILRGLKERYEVHHGVRIKDSALVAAATLSNRYINDRFLPDKAIDLVDEAAARLRVEIDSM PTELDESRRRMLQLQIEEQALSKEEDDASKARLEKIKEELAKLKSENDKLMDQWKAEKGGIAKIRQVKKDMDNVKKEMEE AERSYDLNRLAELKYGKLPELQKQLAALEKEEHSDKRLLKEEVDEDDIAKVVSTWTGIPVNRLMEGEKKKLAHLPEILHK RVIGQDEAVEAVSEAVIRARAGIKDPNKPIGSFIFLGPTGVGKTELAKALAEVLFNDEKSIIRIDMSEYMEKHTVSRLIG APPGYVGYEEGGQLTEAVRRHPYSVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRMVDFKNTLIIMTSNLGSHEIMEK KGAISKDEVRSMLMKFFRPEFLNRVDDIVVFKPLQEEQLKDIVRLILNHLGSRLHSQLELTLTATDDAIAYLAKAGFDPA FGARPLKRLIVHTVETVVSNKIVRGEIQRGDHIEVVFKDGNIDVVKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 8e-104 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Acfer_1961 | YP_003399627.1 | ATP-dependent chaperone ClpB | VFG2076 | Protein | 7e-124 | 45 |
| Acfer_1961 | YP_003399627.1 | ATP-dependent chaperone ClpB | VFG2084 | Protein | 1e-119 | 44 |
