Gene Information

Name : Acfer_1683 (Acfer_1683)
Accession : YP_003399354.1
Strain : Acidaminococcus fermentans DSM 20731
Genome accession: NC_013740
Putative virulence/resistance : Virulence
Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : 2.7.7.38
Position : 1858457 - 1859203 bp
Length : 747 bp
Strand : -
Note : KEGG: gur:Gura_2980 3-deoxy-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase

DNA sequence : 
ATGAAAGTACTCTGTGTAATTCCGGCCCGTTACGGGTCCACTCGTCTGCCGGGGAAACCCCTGGCTCTGATCCATGGCAA
ACCCGTGATCCAGCGGGTCTATGAACGGGCCGCACTGGCCCGGATCCCGGATGAAGTGCTGGTGGCCACTGACGACCAGC
GGATCCTGGATTGCGTCCATTCTTTTGGCGGCCGGGCCGTCATGACGGCGGAAGACCACCCCAGCGGCACCGACCGGCTG
GCGGAAGTTGCCCTCAATTTCGAAGATGTGGATGTGATCGTCAACGTCCAGGGGGATGAACCCATGATCCCGCCCCAGGT
CATCGACGACCTGGCCCAGGCTTTTGCGGAAAATCCCGACCTGGAAATGGCCACCTGCAAAACGGAAATGAACCCGGAAG
ACTACCAGAACCCCAATGCGGTGAAGGTGGTCACCGATCAGAACGGCTACGCCCTGTATTTTTCCCGGAGCCTGATCCCC
TATCCCCGGAACGAGGAACCGGAAGTGAAGGTGTGGAAGCACATCGGCATCTATGCCTACCGCCGGGATTTCCTGCTGAA
GTTCGCGGCGCTGCTGCCCACTCCCCTGGAACGGGTGGAAGGGCTGGAACAGCTCCGGGCACTGGAAAACGGCGTAAAGA
TCAAAGTCCTGGCCACGGATTTCCAGGGCGTGGGCATCGATACCCAGGCCGACCTGGACCGGGCCAATGAAATCTTTGCC
AAACTGGACGCGGAAGGAAAGGAGTAA

Protein sequence : 
MKVLCVIPARYGSTRLPGKPLALIHGKPVIQRVYERAALARIPDEVLVATDDQRILDCVHSFGGRAVMTAEDHPSGTDRL
AEVALNFEDVDVIVNVQGDEPMIPPQVIDDLAQAFAENPDLEMATCKTEMNPEDYQNPNAVKVVTDQNGYALYFSRSLIP
YPRNEEPEVKVWKHIGIYAYRRDFLLKFAALLPTPLERVEGLEQLRALENGVKIKVLATDFQGVGIDTQADLDRANEIFA
KLDAEGKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 6e-48 50
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 5e-48 50
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 1e-47 49