|
Name : Acfer_1427 (Acfer_1427) Accession : YP_003399101.1 Strain : Acidaminococcus fermentans DSM 20731 Genome accession: NC_013740 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 1578101 - 1580095 bp Length : 1995 bp Strand : - Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; t-RNA-binding domain protein; KEGG: fma:FMG_0987 lysyl-tRNA synthetase class II DNA sequence : ATGTCCGACGAAAAGAAGAACCAACCGGACGTAGAGAAGGAAGCCCTGGCGGACGAAGACGTCAGCGAGCAGATGCAGGT CCGTCTGGACAAAATGCATAAATTGGAAGAAAAGGGCATCCGGCCTTTCGGCCATGCCTACCAGTGGACCCACCACACCA AAGAGGTCCACGACCAGGTGGAAGCCATGGAAGCCGCAGGCACCGTGGTGAAAGTGGCCGGCCGTCTCCTGGCCATCCGG GGCCATGGCAAGACCTGTTTCATGGATCTCCAGGACAAGACAGGCAAGATCCAGCTGTACGTCCGGAAGGACGAAATGGG CGAAGATGCCTACAGCGTGGTGAAACTGCTGGATATCGGGGACATCGTGGGGGTGGAAGGCCCTGTCTTCAAGACCCACA TGGGAGAACCCTCCATCCGGGTCCAGAAACTGGAATTCCTCTCCAAGGCCCTGAAACCCCTGCCGGAAAAATGGCATGGG CTGAAGGATAAGGAAATCCGCTACCGTCAGCGGTATGTGGATCTGATCGTGAACCCGGAAGTCCGGGACGTGTTCGTGAA ACGGACCCAGATCATCAAATGCATCCGGCAGGTGCTGGACGACCAGGGCTACCTGGAAGTGGAGACTCCTGTGCTGAACA CCATTTCCGGGGGCGCCACCGCACGGCCCTTCATTACCCATCACAATGCCCTGGACATCGATCTGTACCTGCGGATCGCC ACGGAACTGAACCTGAAGCGTCTGGTGGTAGGGGGTCTGGAACGGGTGTACGAACTGGGCCGGGTGTTCCGGAACGAAGG GATGGACATCAAACACAACCCGGAATTCACCACCCTGGAATGCTATGAAGCCTTCGGGGATTTCAACACCATGATGGACC TGACGGAAAAGATCGTCACCACCTGTGCGGAAAAGGTCCTGGGGACCCTGAAAATCCAGTATGAAGGCACGGAAATCGAC CTGACCGGTCCCTGGCCCCGGATGACCATGATCGACGCTGTGAAGAAATACAGCGGCAAGGACTTCACCGGGGTGAAGGA CGTGGAAACGGCCCGGCAGCTGGCCAGGGAGGCCGGCGTGGCAGTGGAACCCGCCTGGGGTGTGGGTAAGATCATCAACG CTTTCTTCGATGAATTCGTGGAAAAGAACCTGATCCAGCCCATTTTCATCACCGGCCATCCCAAGGAAATCTCCCCGCTG GCCAAGAGCAGCGCGGCGGATCCGGAAATCACCGACCGTTTCGAAGGGTACATCTTCGGCCGGGAACTGTGCAACGGCTT TACCGAACTGAACGATCCCCTGGACCAGAAGGAACGGTTCGAAAAGCAGGTGGAAGAACGGAACGCGGGGGATGACGAAG CGGGCATGATGGACGAAGACTTCATCAACGCCCTGATGCACGGCCTGCCTCCCACAGGGGGCCTGGGCATCGGCATCGAC CGTCTGGTGATGTTCCTCACCGGGGCCGTCTCCATCCGTGACGTGCTGCTGTTCCCCACCATGAAGCCCCTGGACGGCGG GAAGAACGAAGCTCCCAAGGCTCCTGCCGCCGCTCCTGCTGCTGCAGCCGGGGAAACTGCCGCTGCACCGGCATTCACAA CGGTGGCTCCCGAGAAGATCGACTTCTCCAACGTAACCATCGAACCCCTCTTCACCGACTATGTGGACTTCGACAAGTTT GCGGACTGCGATTTCCGGGTGGTGAAGGTGAAGGACTGCTTCGCCGTGCCCAAGAGCAAGAAGCTGCTCCAGTTCACCCT GGACGACGGTACCGGCACCGACCGGACCATCCTCAGCGGAATCAAGGCCTACTACGAACCGGAAGAGCTGATCGGCAAGA CTTGCGTGGCCATTGTCAACCTGCCGCCCCGGAAGATGATGGGCATCGAATCCTGCGGGATGCTGCTCAGCGCGGAACAT ATGGAAGGGGAAGAACGGAAACTCCATCTCCTGATGCTGGATCCCCATATCCCCGCCGGCGCGAAATTGTGCTAA Protein sequence : MSDEKKNQPDVEKEALADEDVSEQMQVRLDKMHKLEEKGIRPFGHAYQWTHHTKEVHDQVEAMEAAGTVVKVAGRLLAIR GHGKTCFMDLQDKTGKIQLYVRKDEMGEDAYSVVKLLDIGDIVGVEGPVFKTHMGEPSIRVQKLEFLSKALKPLPEKWHG LKDKEIRYRQRYVDLIVNPEVRDVFVKRTQIIKCIRQVLDDQGYLEVETPVLNTISGGATARPFITHHNALDIDLYLRIA TELNLKRLVVGGLERVYELGRVFRNEGMDIKHNPEFTTLECYEAFGDFNTMMDLTEKIVTTCAEKVLGTLKIQYEGTEID LTGPWPRMTMIDAVKKYSGKDFTGVKDVETARQLAREAGVAVEPAWGVGKIINAFFDEFVEKNLIQPIFITGHPKEISPL AKSSAADPEITDRFEGYIFGRELCNGFTELNDPLDQKERFEKQVEERNAGDDEAGMMDEDFINALMHGLPPTGGLGIGID RLVMFLTGAVSIRDVLLFPTMKPLDGGKNEAPKAPAAAPAAAAGETAAAPAFTTVAPEKIDFSNVTIEPLFTDYVDFDKF ADCDFRVVKVKDCFAVPKSKKLLQFTLDDGTGTDRTILSGIKAYYEPEELIGKTCVAIVNLPPRKMMGIESCGMLLSAEH MEGEERKLHLLMLDPHIPAGAKLC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 5e-106 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Acfer_1427 | YP_003399101.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 3e-106 | 47 |
