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Name : Acfer_0134 (Acfer_0134) Accession : YP_003397857.1 Strain : Acidaminococcus fermentans DSM 20731 Genome accession: NC_013740 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 156327 - 157607 bp Length : 1281 bp Strand : + Note : KEGG: chy:CHY_2697 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl- tRNA synthetase, class IIa-like DNA sequence : ATGTTGGATCTGAAATTTGTCCGGGACAACACGGAAAAGGTTGCCCAGGCTCTGAAAAACCGTCATGCCAAAGTGGATCT GGAAGAATTCAAGAAGCTGGACCAGGAACGGCGTTCCCTGCTCCAGGAAGTGGAAGCGGACAAGAGCCAGCGGAATACGG TGAGCGCTGAAATCAGCCAGATGAAGCGCAATGGGGAAGACGCAACGGAAAAAATCACCGCCATGCGGGCCCTGGGTGAC AAGATCGCAGAAGCGGATAAAAAAGTGAAGGATGTGGAAGCCCGGCTCCAGGCTGTGATGCTGACCATCCCCAATATGCC TGCAGCGGATGTGCCGGTGGGCAAGGACGATACGGAAAATCCGGAAGTGCGGAAATGGGGCGAACCCACCCACTTTGATT TCGAACCGAAAGCCCATTGGGAAATCGGGGAAAAACTGGGGATCCTGGATGCGGAACGGGCAGCCAAGGTTTCCGGTGCC CGGTTCTACTATTACAAAGGGGCCGGCGCCCGTCTGGAACGTGCGGTGTACAACTTCATGCTGGACCAGCACACCCGGAA AGACGGCTATATGGAAGTGATCCCGCCCTACATCGTGAACACCGCTTCCATGACCGGTACCGGGCAACTGCCCAAATTCC ACGAAGACATGTACAAGGTGGAAGGCCAGGATATGTACCTGATCCCCACTGCGGAAGTGCCTCTGACCAACTATTACCGG GGAGAGATCCTGAACGGGGATGACCTGCCCATCTACCTGACTGCCATGACCCCCTGCTTCCGGGCCGAAGCCGGCAGCGC AGGCCGGGATACCCGGGGCCTGATCCGGCAGCACCAGTTCCACAAAGTGGAAATGGTGAAGTTCTGCAAACCGGAGACCA GCTATGATGAACTGGAAAAACTGGTGGGCAATGCGGAAGACATCCTGAAAGCCCTGAAACTGCCCTACCATGTGGTCTGC CTGTGCACCGGGGATTTGGGCTTTTCTGCCGCCAAATGCTACGATGTGGAAGTCTGGTTCCCGGAACAGAACAAATACCG GGAAATCTCTTCCTGCTCCAATACGGAAGATTTCCAGGCCCGCCGGGCCAACATCCGGTTCCGCCGGGATGCCAAATCCA AACCGGAATACGTCCATACCCTCAACGGCTCCGGTCTGGCAGTAGGCCGTACGGTAGCCGCCATCCTGGAAAACTATCAG CAGGCTGACGGATCCGTGGTGGTGCCGGAAGTGCTCCGTCCCTACATGGGCTGTGACGTGATCACAGGCGCCAACTCCTG A Protein sequence : MLDLKFVRDNTEKVAQALKNRHAKVDLEEFKKLDQERRSLLQEVEADKSQRNTVSAEISQMKRNGEDATEKITAMRALGD KIAEADKKVKDVEARLQAVMLTIPNMPAADVPVGKDDTENPEVRKWGEPTHFDFEPKAHWEIGEKLGILDAERAAKVSGA RFYYYKGAGARLERAVYNFMLDQHTRKDGYMEVIPPYIVNTASMTGTGQLPKFHEDMYKVEGQDMYLIPTAEVPLTNYYR GEILNGDDLPIYLTAMTPCFRAEAGSAGRDTRGLIRQHQFHKVEMVKFCKPETSYDELEKLVGNAEDILKALKLPYHVVC LCTGDLGFSAAKCYDVEVWFPEQNKYREISSCSNTEDFQARRANIRFRRDAKSKPEYVHTLNGSGLAVGRTVAAILENYQ QADGSVVVPEVLRPYMGCDVITGANS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-134 | 65 |
