Gene Information

Name : Acfer_1207 (Acfer_1207)
Accession : YP_003398883.1
Strain : Acidaminococcus fermentans DSM 20731
Genome accession: NC_013740
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1335574 - 1336479 bp
Length : 906 bp
Strand : -
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: sth:STH1821 recombinase

DNA sequence :
ATGATCAGGGTGTCACTGCGAAATAATCTGGAAAAAGAAATCAATCTGTTTTTGGAATATCTGACGGTGGAACTGGGGCT
GGCCTACAACACCCGGGAATCCTATGGCCGGGATCTCCGTCTGTTTGCCGGCTGGATCAAAAAGCCCCTGGAGGATGTGA
AACGGGAAGACATCCTGGCATACATGCGGATGCTGAAGGTGCACCAGTATGCTCCCACCTCTGCTTCCCGGAAGCTGGCG
GCCCTCAAGGCCTTCTTCCGGTTCATGACGGCGGAAGGCTTCCTGGAGGAAGATCCCTCCGAAGTGGTGGAAGCCGGCAC
CCGGGGAGTGGTGCTGCCCAAGGTCATGAGCCTGGAGGAAGTGAAACAGCTGTTTTCCGCTCCCGACCTGACCCAGCCGG
AAGGGTTCCGGGACCGGACCATGCTGGAAGTGATGTACGCCACCGGCATGCGGGTATCGGAACTGCTGAGCCTGAAACGG
GCCAGCGTGAACCTGGAGACCCGGTATGTGATCGCTTACGGCAAAGGGGCCAAGGAACGGCTGATCCCGCTGGGCCAGTA
TGCCATCCAGTATCTGAAGAAGTACCTGGCCCAGGTGCGGCCCCTGTTCGTGAAGAACGGGAAGGATGACGACAGCCTGT
TTCTGACCATCCGGGGTACCGGCATGACCCGGCAGCGGTTCTGGCAGATCATCCGTGCCTACGGGGTGAAGGCGGGGCTC
CAGAAACCGCTTACGCCTCATATCCTGCGCCATTCCTTTGCCACCCACATGCTGGACAACGGGGCGGATCTCCGGACGGT
CCAGGAACTGCTGGGCCATGCGGACATTTCCACCACCCAGATCTATACCCATCTCACCAACAACCGTCTGAAGAAAGTCT
TTGACAAAACCCATCCCAGAGCCTAG

Protein sequence :
MIRVSLRNNLEKEINLFLEYLTVELGLAYNTRESYGRDLRLFAGWIKKPLEDVKREDILAYMRMLKVHQYAPTSASRKLA
ALKAFFRFMTAEGFLEEDPSEVVEAGTRGVVLPKVMSLEEVKQLFSAPDLTQPEGFRDRTMLEVMYATGMRVSELLSLKR
ASVNLETRYVIAYGKGAKERLIPLGQYAIQYLKKYLAQVRPLFVKNGKDDDSLFLTIRGTGMTRQRFWQIIRAYGVKAGL
QKPLTPHILRHSFATHMLDNGADLRTVQELLGHADISTTQIYTHLTNNRLKKVFDKTHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-54 44
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-54 44