Gene Information

Name : Acfer_1166 (Acfer_1166)
Accession : YP_003398843.1
Strain : Acidaminococcus fermentans DSM 20731
Genome accession: NC_013740
Putative virulence/resistance : Unknown
Product : transposase, IS605 OrfB family
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0675
EC number : -
Position : 1291416 - 1292525 bp
Length : 1110 bp
Strand : -
Note : TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; KEGG: gwc:GWCH70_3000 transposase, IS605 OrfB family

DNA sequence :
GTGAATAAGACCTACCGATACAGGCTCTACCCGACAACTGAACAAAAGATTATGTTTGCCAAGACTTTCGGCTGTGCCAG
ATTCATCTATAACAAGATGCTTGGAGATCGTCTTGATTACTATAAGGAAACAGGCAAGAGGCTGAACAATACACCTGCAC
AGTACAAGAAAGAATTTCCTTGGCTGAAAGAGGTTGACAGCCTTGCTCTCGCCAATGCCCAAATAAACCTGAACAAGGCA
TATAACAACTTTTGGAGCAATAGGAAGCATTTTGGCAAGCCACACTTCAAGTCGAAAAAAACAGGTCATGCTTCATATTC
TACGAATAACCAACATGGCTCTGTAAGAATCGAGGGAAACAAGGTCAAGCTGCCTAAAACAGGCTGGGTAAAGCTGTGTC
TGCATCGTCCATTGATGGAGAATAGCACCATAAAGACTGTAACCATAAGTAAAACACCGTCCGGAAAATACTATATCAGT
ATTTTGGTTGAGTATGAAAACCAAATACTTTCCATCATACCGAAGAATTTTCTTGGATTGGATTTTGCTATGCACGGTCT
GTATGTTGCTTCCGATGAGGACAATGCCGATTATCCAAATTTCTTACGGAAAGCCGAAGAGAGATTGGTCAAGGCACAAA
GAAAACTCTCTAAGAGACAAAAAGGGAGCCGTAACAGGAATAAGCAAAGACTGCGTGTGGCTGTACTCCATGAGAAAATT
GCTAATCAACGCCGTGACTTCCTGCATAAGAAAGCTCGTTATCTTGCAGACCGCTATGATGCGATTGGCATAGAGGATAT
TAGCGTAAAAGCCATGGCGAAGCGAAAGAAGGGTGGCAAGTTCAGCTTTGGTAAATCCATATCCGACAATGGCTGGAGCA
TGTTCACAAGTATGCTGGAATACAAACTTGCATGGCAGGGCAAGCAACTTATCAAGATAGACAAATGGTATCCAAGCAGT
CAGCTATGCCATGTTTGTGGCTACCAGAACAATAACACCAAAGACTTATCTGTGCGGAAATGGGATTGCCCTAAGTGTGG
CAGTCATCATAACCGTGACAAGAACGCTGCAATAAACATTAGAGAAGAAGCTAGGCGAATATCTGCCTAG

Protein sequence :
MNKTYRYRLYPTTEQKIMFAKTFGCARFIYNKMLGDRLDYYKETGKRLNNTPAQYKKEFPWLKEVDSLALANAQINLNKA
YNNFWSNRKHFGKPHFKSKKTGHASYSTNNQHGSVRIEGNKVKLPKTGWVKLCLHRPLMENSTIKTVTISKTPSGKYYIS
ILVEYENQILSIIPKNFLGLDFAMHGLYVASDEDNADYPNFLRKAEERLVKAQRKLSKRQKGSRNRNKQRLRVAVLHEKI
ANQRRDFLHKKARYLADRYDAIGIEDISVKAMAKRKKGGKFSFGKSISDNGWSMFTSMLEYKLAWQGKQLIKIDKWYPSS
QLCHVCGYQNNNTKDLSVRKWDCPKCGSHHNRDKNAAINIREEARRISA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_0626 YP_697953.1 ISCpe2, transposase orfB Not tested Not named Protein 8e-56 41