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Name : Acfer_1122 (Acfer_1122) Accession : YP_003398804.1 Strain : Acidaminococcus fermentans DSM 20731 Genome accession: NC_013740 Putative virulence/resistance : Unknown Product : integrase family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 1251425 - 1252717 bp Length : 1293 bp Strand : - Note : PFAM: integrase family protein; Tn916 integrase domain protein DNA binding; KEGG: sss:SSUSC84_0823 integrase DNA sequence : ATGAAAAGACGTATGACAGGCCGGATCCGAAGAGATAAGAAAAGACGGATCCTACGGCCGGGAGAGTCTGTTCGGATTGA TGGTAAGTACCAATTTAAATACATGGTGGATGGCAAACCCAAATTCTTTTACAGCTGGAAACTGGAGCCTACGGACCCAT TGCCACCAGGAAGAAAGCATTGCCGGTCCCTTCGGGAGATGGAAGACAGCCTGGAGGTCCGCTTGGTGATCTGCCCCAAT GCCAACAGCGATTCCATGACCGTCCTGGAACTGGTTCAGCGCTATCTGCTTCTCAAAAAGAGTGTGAAACCAAACACATT GACCAATTACCGGTTTGTGGTCAATGCCCTAAAGAAAGAGCCCTTTTCCCAGAAGGCTATTGGGAAGGTGAAAATGTCCG ATGCCAAATTATGGTTGGTCAAGTTACAGTCAGAAGGAAAAAGCTACAGTTCCATCCACAGCATCCGGGGTGTGGTGCGG CCCGCCTTCCAAATGGCCGTAGATGATGAAATCTTGTGGAGAAATCCCTTTAACTTCGAACTGAAAGAAGTCCTGATCAA CGACAGCGTAAGGCGGGAGGCTCTTTCAAAAAGAGATATGCGGATTTTTCTGGATTTCATTAAAAACGACTCCCACTACA AGAGATATTATGAAGGAATCTTCATCCTGTTCCATACAGGGTTGCGGGTATCAGAATTCTGTGGACTGACGGTGAACGAT ATCGACCTGGAAAAAAGGACGATCAACGTGGACAAACAGCTCCAAAAGGGGAATGGAAAATATTACATTCTTTCTACAAA AACCAAAGCGGGGGCCAGGTTGCTGCCCATGACCGATGAGGTCTACCAATGCTTTGCGGCTATCCTGGAGCGGAGAAGAC CGCCGAAGGTAGAACCCATCATCGATGGGGTGGGGAAATTCCTTTTTTATGATGTGAATGGACATCCAACAGTAGCCTTG CACTGGGAACATTACTTCAAACTTATCGTGCGGAAACACAACAGCATCTATAAATATCAGCTTCCCAGGATTACGCCCCA TGTTTGTCGCCATACATACTGCACCAATATGGCCCTTTCCGGGGTCAGTGCCAAGACTCTCCAGTACCTGATGGGGCACA GCGACATTTCCATCACCCTGAATGTGTACACCCACATCAAGTTCGATGACGCCCAGAAAGAAGTGGCACTCATCCAGGCC CGGCAGCAGAAGGAGATGGAAAACGTCCGAAAAGAACTGGAGCAGGTGGGCGAGATCCAGCCCAAGGTGATCCGGTTTCC CAATAAGGCGTGA Protein sequence : MKRRMTGRIRRDKKRRILRPGESVRIDGKYQFKYMVDGKPKFFYSWKLEPTDPLPPGRKHCRSLREMEDSLEVRLVICPN ANSDSMTVLELVQRYLLLKKSVKPNTLTNYRFVVNALKKEPFSQKAIGKVKMSDAKLWLVKLQSEGKSYSSIHSIRGVVR PAFQMAVDDEILWRNPFNFELKEVLINDSVRREALSKRDMRIFLDFIKNDSHYKRYYEGIFILFHTGLRVSEFCGLTVND IDLEKRTINVDKQLQKGNGKYYILSTKTKAGARLLPMTDEVYQCFAAILERRRPPKVEPIIDGVGKFLFYDVNGHPTVAL HWEHYFKLIVRKHNSIYKYQLPRITPHVCRHTYCTNMALSGVSAKTLQYLMGHSDISITLNVYTHIKFDDAQKEVALIQA RQQKEMENVRKELEQVGEIQPKVIRFPNKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| int | YP_008394266.1 | integrase | Not tested | Not named | Protein | 8e-66 | 41 |
