Gene Information

Name : Acfer_1085 (Acfer_1085)
Accession : YP_003398769.1
Strain : Acidaminococcus fermentans DSM 20731
Genome accession: NC_013740
Putative virulence/resistance : Unknown
Product : SNF2-related protein
Function : -
COG functional category : K : Transcription
COG ID : COG0553
EC number : -
Position : 1215220 - 1216569 bp
Length : 1350 bp
Strand : -
Note : PFAM: SNF2-related protein; SMART: DEAD-like helicase; KEGG: det:DET1096 SNF2 domain-containing protein

DNA sequence :
ATGAAATTCGTACCCCATGCGTATCAGCAATACGCCATCGAATACATCAAGACTCATCCGGTAACGGCGCTTCTCCTGGA
CATGGGTTTGGGAAAGACGGTGACCACCCTTACGGCCATCCGGGACCTGATGCAGGACACCTTTGAAGTCCAGCGGGTCC
TTGTGGTGGCTCCCCTTCGGGTGGCTCGGGACACATGGCCGGAGGAGATCCGGAAATGGGACCACCTGAAAGATCTCACC
TGCAGCGTGGTGGTGGGCACCGTGACGGAAAGAAGGCGGGCCCTCCAGAAAGCGGCGGACATCTACATCGTGAACCGGGA
GAACCTGGTGTGGCTCTCCCGGAACTGCCGACTGGATTTTGACATGGTGGTCCTGGACGAACTTTCCTCTTTCAAGAATC
CCCAGGCCCAGCGGTTCAAAGCCATGAAGGCCCTGCGGCCTAAGGTGAAACGGATTGTGGGCCTTACAGGAACTCCCAGC
GGTAATGGGCTTATGGACCTGTGGGCCGAATTCCGGCTTTTGGATATGGGGGAAAGACTAGGAAAGTACATCAGCCAGTA
CCGGAACACCTACTTTCAGCCGGACAAGCGGAATGGAATGGTGGTCTTTTCCTACAAGCACTTGCCAGGAGCGGAAGAAG
CCATCTACCGGAAAATTTCGGATATCACCGTCTCCATGAAGGCCACGGACTACCTGAAGATGCCGGACCTGGTGAGCGTC
CGGACCGAGGTGAATCTTTCAGAAGCGGAACGGAAGCGGTATCAAGATTTCAAAAAGTCTCTGGTGATGGAACTGCCAGG
CGGGGAAGTGACAGCAGCCAATGCGGCTTCCCTGACGTTGAAGCTCACCCAGATGGCCAACGGAGCCATCTATACCGATG
ATGGGAAGACCATCCATCTTCACGACCGAAAGTTGGATGCCTTGGAAGATCTGGTAGAAAGTGCCAATGGCCGGCCGGTG
CTAGTGGCCTATTGGTTCCGTCATGACAAGGAGCGGATCTGTCAGCGGATGGAAGCTAGGGAGCTGAAGTCATCCCAGGA
TTTTGCAGACTGGAATGCCGGGAAGATTCCGGTGGCTCTCATTCACCCAGCTTCTGCCGGCCATGGCCTCAACCTGCAGC
AGGGTGGGTCCATCCTGATCTGGTTCGGGCTCACCTGGAGTTTGGAACTGTACCAGCAAACGGTGGCCAGGCTCTGGCGG
CAGGGACAGGAAAGCCGGACGGTGATTGTCCAGCACATTGTGACCAAGAGCACCATTGACGAACGGATTCTGAAAGCCCT
GGAAAAGAAAGACAGTTCTCAAGCGGCATTGATTGAAGCTGTCAAAGCGGATTTGGAGGAAAAAGCATGA

Protein sequence :
MKFVPHAYQQYAIEYIKTHPVTALLLDMGLGKTVTTLTAIRDLMQDTFEVQRVLVVAPLRVARDTWPEEIRKWDHLKDLT
CSVVVGTVTERRRALQKAADIYIVNRENLVWLSRNCRLDFDMVVLDELSSFKNPQAQRFKAMKALRPKVKRIVGLTGTPS
GNGLMDLWAEFRLLDMGERLGKYISQYRNTYFQPDKRNGMVVFSYKHLPGAEEAIYRKISDITVSMKATDYLKMPDLVSV
RTEVNLSEAERKRYQDFKKSLVMELPGGEVTAANAASLTLKLTQMANGAIYTDDGKTIHLHDRKLDALEDLVESANGRPV
LVAYWFRHDKERICQRMEARELKSSQDFADWNAGKIPVALIHPASAGHGLNLQQGGSILIWFGLTWSLELYQQTVARLWR
QGQESRTVIVQHIVTKSTIDERILKALEKKDSSQAALIEAVKADLEEKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_2070 YP_002747285.1 SNF2 family phage protein Not tested ¥ÕSeq4 Protein 9e-91 52
SAUSA300_1408 YP_494105.1 phage helicase Not tested ¥ÕSa2 Protein 6e-94 51
MW1405 NP_646222.1 hypothetical protein Not tested ¥ÕSa2 Protein 3e-100 51
SAOV_0314 YP_005735831.1 putative DNA helicase Not tested ¥ÕSa1 Protein 4e-100 51
SH1779 YP_253694.1 hypothetical protein Not tested ¥ÕSh1 Protein 8e-100 50