|
Name : Acfer_1057 (Acfer_1057) Accession : YP_003398741.1 Strain : Acidaminococcus fermentans DSM 20731 Genome accession: NC_013740 Putative virulence/resistance : Unknown Product : integrase family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 1193672 - 1194970 bp Length : 1299 bp Strand : - Note : PFAM: integrase family protein; Tn916 integrase domain protein DNA binding; KEGG: cdf:CD1091 integrase DNA sequence : ATGAAAAAAATCCATATGCGGGGCCGTGTGCGCCGGGACAAGAAAAGAAGGATCTTACGGGCGGGAGAGTCCGTGCGGAT CGATGGAAAGTATCAGTTCAAATATATGGTGAACGGGCGGCCGAAATTCCTGTACAGCTGGAAGCTGGAGCCTACGGATC CCTTGCCGCCGGGACGGAAACCCTGCCTATCCCTCCGGGAAATGGAAGACAGCCTGGAAGTGAAACTGGTGATCTGCCCC AATGCCCATTCGGATTCCATGACCGTCCTGGAACTGGTCCAGCGGTACCTGATGCTGAAAAAGGGTGTCAAACCCAATAC CCTGAGCAACTACAAGTTCGTGGTCAATGCCCTGAAGAAAGAACGCTTTGCCCAGAAAGCCATTGGGAAAGTGAAAATGT CCGATGCCAAATTATGGCTGATCAAATTGCAGTCCGAAGGAAAGGGATACAGTTCCATTCACAGCATCCGGGGTGTGGTG CGGCCCGCCTTCCAAATGGCTGTAGATGATGAAATCTTGTGGAGAAATCCCTTTAATTTCGAAATGAAAGAGGTCTTGAT CAACGACAGTGTGAGAAGGGAAGCTCTTTCCAAAAGAGATATGCGGATTTTCCTGGATTTCGTAAAGAATGACGAGTATT ATTGTAGATATTATGAGGGAATTTTCATCCTGTTCCATACTGGGCTGCGGATCTCGGAATTTTGCGGATTGACGGTAAAC GATATCGACTTGGAAAAAAGAACAATCAACGTGGACAAGCAGCTCCAGAAAGGGAACGAGAGGAAGTACTACATCCTTTC TACAAAAACCAAGGCCGGAGCCAGGCTGCTGCCCATGACGGATGAGGTTTACCAATGCTTTGTGACCATCCTGCAGCGCA GAAGACCTCCGAAGGTAGAACCCATCATCGATGGCGTTGGTAAATTTCTCTTTTATGATAAAAATGGGAATCCAATGGTA GCCTTGCATTGGGAACATTATTTTAAGCAAATCGTGAATAAATACAACCGCATCTATAAATATCAGCTTCCAAAAGTTAC ACCTCATGTCTGCCGCCACACCTACTGCACCAATATGGCTCTGTCCGGGGTCAGTGCCAAGACCCTCCAGTACCTGATGG GCCACAGCGACATTTCCATCACCCTCAATGTGTACACCCATATCAAGTTCGATGATGCCCAAAAGGAAGTGGAACTGATC CAGATACGGCAGCAGAAGGAGATGGAAAACGTACGGAAAGAACTGGAGCAGGTGGGAGAAATCCAGCCCAAGGTGATCCG GTTTCCCAATAAGGCGTGA Protein sequence : MKKIHMRGRVRRDKKRRILRAGESVRIDGKYQFKYMVNGRPKFLYSWKLEPTDPLPPGRKPCLSLREMEDSLEVKLVICP NAHSDSMTVLELVQRYLMLKKGVKPNTLSNYKFVVNALKKERFAQKAIGKVKMSDAKLWLIKLQSEGKGYSSIHSIRGVV RPAFQMAVDDEILWRNPFNFEMKEVLINDSVRREALSKRDMRIFLDFVKNDEYYCRYYEGIFILFHTGLRISEFCGLTVN DIDLEKRTINVDKQLQKGNERKYYILSTKTKAGARLLPMTDEVYQCFVTILQRRRPPKVEPIIDGVGKFLFYDKNGNPMV ALHWEHYFKQIVNKYNRIYKYQLPKVTPHVCRHTYCTNMALSGVSAKTLQYLMGHSDISITLNVYTHIKFDDAQKEVELI QIRQQKEMENVRKELEQVGEIQPKVIRFPNKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| int | YP_008394266.1 | integrase | Not tested | Not named | Protein | 1e-69 | 41 |
