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Name : Acfer_0098 (Acfer_0098) Accession : YP_003397822.1 Strain : Acidaminococcus fermentans DSM 20731 Genome accession: NC_013740 Putative virulence/resistance : Virulence Product : two component transcriptional regulator, winged helix family Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 119931 - 120605 bp Length : 675 bp Strand : + Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bcg:BCG9842_B2033 DNA-binding response regulator DNA sequence : ATGAAAATCCTGGTGGTGGAAGATGAACCCACGCTGAATAAAATCATTGCCAAACGGCTGAAAATCGAAGCTTATTCGGT GGACTGCGCTTTTAACGGAAAGGAAGCACTGGACTATCTGGATGCGGCGGAATATGATCTGCTGATCGTGGATATCATGA TGCCGGAAATGGACGGACTGACCCTTGTGAAAAAGCTCCGGGACGGAGGCAGCCGGGTGCCGGTCCTGTTCCTGACGGCC CTGGACAGCACCCAGGACAAGGTCACCGGCCTGGACAGCGGCGGGGACGATTATCTGGTAAAGCCCTTTGAATTCGATGA ACTGCTGGCCCGGATCCGCAGCCTGCTCCGGCGGAGCAATGCCCAGCAGACCGCCCGGACCCGGCTGACCCTGGCGGATC TGACCCTGGACACCCGGACCCATCAGGTGACCCGGGGCGGGCAGGAAATTGCCCTGACCCCCAAGGAATTCTCCGTGCTG GATTATCTCCTGCGGAACCAGGGAACGGTGCTTTCCCGGGAACAGATCCTGGAACATGCCTGGGATTTTTCTTATGAAGG ATATTCCAATATGGTGGATGTGTACATCAAGACCCTGCGGAAGAAAATCGACAGGGATTTTGAACCCAAGCTGCTCCACA CGGTACGGGGGACCGGCTATGTGCTCAAAGTGTAG Protein sequence : MKILVVEDEPTLNKIIAKRLKIEAYSVDCAFNGKEALDYLDAAEYDLLIVDIMMPEMDGLTLVKKLRDGGSRVPVLFLTA LDSTQDKVTGLDSGGDDYLVKPFEFDELLARIRSLLRRSNAQQTARTRLTLADLTLDTRTHQVTRGGQEIALTPKEFSVL DYLLRNQGTVLSREQILEHAWDFSYEGYSNMVDVYIKTLRKKIDRDFEPKLLHTVRGTGYVLKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 6e-26 | 42 |
| copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 3e-25 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Acfer_0098 | YP_003397822.1 | two component transcriptional regulator, winged helix family | BAC0125 | Protein | 5e-33 | 47 |
| Acfer_0098 | YP_003397822.1 | two component transcriptional regulator, winged helix family | BAC0111 | Protein | 1e-35 | 47 |
| Acfer_0098 | YP_003397822.1 | two component transcriptional regulator, winged helix family | BAC0083 | Protein | 1e-36 | 47 |
| Acfer_0098 | YP_003397822.1 | two component transcriptional regulator, winged helix family | BAC0638 | Protein | 2e-28 | 47 |
| Acfer_0098 | YP_003397822.1 | two component transcriptional regulator, winged helix family | BAC0347 | Protein | 9e-30 | 46 |
| Acfer_0098 | YP_003397822.1 | two component transcriptional regulator, winged helix family | BAC0197 | Protein | 2e-31 | 46 |
| Acfer_0098 | YP_003397822.1 | two component transcriptional regulator, winged helix family | BAC0308 | Protein | 4e-33 | 44 |
| Acfer_0098 | YP_003397822.1 | two component transcriptional regulator, winged helix family | NC_007793.3914065.p0 | Protein | 8e-27 | 43 |
| Acfer_0098 | YP_003397822.1 | two component transcriptional regulator, winged helix family | NC_002758.1121390.p0 | Protein | 8e-27 | 43 |
| Acfer_0098 | YP_003397822.1 | two component transcriptional regulator, winged helix family | NC_010079.5776364.p0 | Protein | 8e-27 | 43 |
| Acfer_0098 | YP_003397822.1 | two component transcriptional regulator, winged helix family | NC_002952.2859858.p0 | Protein | 8e-27 | 43 |
| Acfer_0098 | YP_003397822.1 | two component transcriptional regulator, winged helix family | NC_007622.3794948.p0 | Protein | 8e-27 | 43 |
| Acfer_0098 | YP_003397822.1 | two component transcriptional regulator, winged helix family | NC_003923.1003417.p0 | Protein | 8e-27 | 43 |
| Acfer_0098 | YP_003397822.1 | two component transcriptional regulator, winged helix family | NC_013450.8614146.p0 | Protein | 8e-27 | 43 |
| Acfer_0098 | YP_003397822.1 | two component transcriptional regulator, winged helix family | NC_002951.3238224.p0 | Protein | 8e-27 | 43 |
| Acfer_0098 | YP_003397822.1 | two component transcriptional regulator, winged helix family | AE015929.1.gene1106. | Protein | 5e-22 | 42 |
| Acfer_0098 | YP_003397822.1 | two component transcriptional regulator, winged helix family | BAC0288 | Protein | 9e-21 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Acfer_0098 | YP_003397822.1 | two component transcriptional regulator, winged helix family | VFG1390 | Protein | 5e-36 | 46 |
| Acfer_0098 | YP_003397822.1 | two component transcriptional regulator, winged helix family | VFG1386 | Protein | 1e-35 | 44 |
| Acfer_0098 | YP_003397822.1 | two component transcriptional regulator, winged helix family | VFG0596 | Protein | 2e-26 | 42 |
| Acfer_0098 | YP_003397822.1 | two component transcriptional regulator, winged helix family | VFG0473 | Protein | 1e-20 | 41 |
