Gene Information

Name : Cwoe_0066 (Cwoe_0066)
Accession : YP_003391877.1
Strain : Conexibacter woesei DSM 14684
Genome accession: NC_013739
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 61517 - 62158 bp
Length : 642 bp
Strand : +
Note : TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; KEGG: bba:Bd3325 flagellar biosynthesis protein FliP

DNA sequence :
GTGAACACGGTCGACGGCGACAGCGCGATCCAGGTCCTGCTGCTGATCGGCGCCTTCACGCTGATCCCGGCCGGCCTCTT
CTGCCTCACCGGCTTCACGCGCATCCTGATCGTGCTCGGCTTCATCCGCACCGCGATCGGCACGCCGACGGCGCCGCCGA
ACCAGGTGCTCGTCGGGATCGCGCTGTTCCTGACGCTGTTCGTGATGGCGCCGACCTTCACGCAGATCAAGGAGACCGCC
TGGGATCCGCTGGAGGCCGGCAGAATCAACACCGCCCAGGCGGTCAGACGCGCCGAGGAGCCGCTGCGTCAGTTCATGTT
CGAGCAGACGCGCACGAAGGACCTCGCGCTGTTCGTGCGGCTGTCGAGAACGAGAGAGCAGCCGAGAACGCGCGCCGACA
TCCCGACGACCGTCCTGATCCCGGCGTTCATCGTCAGCGAGCTGAAGACGGCGTTCCAGATCGGCTTCATGATCTTCCTG
CCGTTCCTGGTGATCGACCTGATCGTCGCCTCGACCTTGATGAGCATGGGGATGATCATGCTCCCACCGGTCTTCATCTC
GCTGCCGTTCAAGATCCTGCTGTTCGTGCTCGTCGACGGCTGGGCGCTGATCACCGACTCGCTGGTCCGAAGTTTCAACT
GA

Protein sequence :
MNTVDGDSAIQVLLLIGAFTLIPAGLFCLTGFTRILIVLGFIRTAIGTPTAPPNQVLVGIALFLTLFVMAPTFTQIKETA
WDPLEAGRINTAQAVRRAEEPLRQFMFEQTRTKDLALFVRLSRTREQPRTRADIPTTVLIPAFIVSELKTAFQIGFMIFL
PFLVIDLIVASTLMSMGMIMLPPVFISLPFKILLFVLVDGWALITDSLVRSFN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 2e-24 45
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 4e-28 44
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 4e-28 44
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 4e-28 44
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 2e-24 44
hrcR AAG33884.1 HrcR Virulence Hrp PAI Protein 1e-23 44
hrcR NP_791222.3 type III secretion protein HrcR Virulence Hrp PAI Protein 6e-23 44
hrcR ABQ88359.1 HrcR Virulence Hrp PAI Protein 4e-21 42
hrpW AAB05075.1 HrpW Virulence Hrp PAI Protein 4e-21 42
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 3e-28 42
yscR NP_456109.1 putative type III secretion protein Virulence SPI-2 Protein 1e-31 42
yscR NP_805090.1 type III secretion system protein Virulence SPI-2 Protein 1e-31 42
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 7e-32 42
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 7e-32 42
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 5e-32 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cwoe_0066 YP_003391877.1 flagellar biosynthetic protein FliP VFG1259 Protein 1e-54 57
Cwoe_0066 YP_003391877.1 flagellar biosynthetic protein FliP VFG2016 Protein 1e-53 55
Cwoe_0066 YP_003391877.1 flagellar biosynthetic protein FliP VFG2494 Protein 2e-51 53
Cwoe_0066 YP_003391877.1 flagellar biosynthetic protein FliP VFG2338 Protein 2e-50 52
Cwoe_0066 YP_003391877.1 flagellar biosynthetic protein FliP VFG0519 Protein 2e-32 42
Cwoe_0066 YP_003391877.1 flagellar biosynthetic protein FliP VFG0044 Protein 5e-31 41