Gene Information

Name : Cwoe_0041 (Cwoe_0041)
Accession : YP_003391852.1
Strain : Conexibacter woesei DSM 14684
Genome accession: NC_013739
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.14
Position : 41141 - 42610 bp
Length : 1470 bp
Strand : +
Note : KEGG: dde:Dde_0350 ATPase FliI/YscN; TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; H+transporting two-sector ATPase alpha/subunit beta domain protein; SMA

DNA sequence :
ATGAGCCCCGAGGACCAGACACCGGACGCCGTCGTCGCCGAGCAGCTCGGCGACCGCCTCAAGCACGTCGGCAACGTCCT
GCGCGCGAGCGACCTCGCGCGCCGGCACGGCCGCGTCAGCGACCTGATCGGGCTCGTCGTCGAGGCGACCGGGCTGCAGG
CCGAGGTCGGCGAGATCTGCATGGTCAACGGCGACCGCGGCCACCCGCCGGTACCGGCGGAGGTCGTCGGCTTCCGCGGT
GCCCGCACGCTGCTGATGCCGCTCGGCGAGATGCACGGCATCGGCCCGGCGACGACCACCCGCGCGACCGGCACGCCGTT
CCGCATCCGCGTCGGCCAGGACCTGCTCGGCCGCGTGATCGACGGGCTCGGCAAGCCGATCGACGGGATGCCGCGCGCGA
CCAACGGCCATCCGCGTTCGACGAACGCCTCGCCGCCGGACCCGCTCGACCGCCCCCGCATCGACCAGCGCGTCGACCTC
GGCGTGCGCGCGCTCGACGCGCTCGTGCCGTGCGGACGCGGCCAGCGCCTCGGCATCTTCGCCGGCTCCGGCGTCGGCAA
GTCGTCGCTGCTCGGCATGATCGCCCGCTCGACGACGGCGGACGTCAACGTGATCGCGCTGGTCGGCGAGCGCGGCCGCG
AGGTGAAGGAGTTCGTCGAGCGTGACCTCGGCGACGCGCTGTCACGCTCGGTCGTCGTCGTCGCGACCTCCGACCAGCCG
GCGCTCGTCCGCATCAAGGCCGCGTTCACGGCGACGGCGATCGCCGAGCACTTCCGTGACCAGGGCAACGACGTGATGCT
GATGATGGACTCCGTCACGCGCTTCGCGATGGCCCAGCGCGAGGTCGGCCTGGCGATCGGCGAGCCGCCGGCGACGCGCG
GCTACACGCCGAGCGTCTTCGCCCAGCTGCCGCGCCTGCTGGAGCGCTCCGGCACCGCCAGAACCGGCTCGATCACCGGC
CTCTACACCGTGCTCGTCGACGGCGACGACATGAACGAGCCGATCGCCGACGCGGTCCGCTCGATCCTCGACGGTCACGT
CGTGCTGACGCGCGAGCTGGCGCACGCCTCCCACTACCCCGCGATCGACGTGCTGCAGAGCGTCTCCCGCCTCGTCGGCG
AGATCGTCTCGCCGGAGGTCCGCGCCGCCGGCCAGGCGGTCCGCCAGCTGATGGCCTCCTACAAGGAGAAGGAGGACCTG
ATCGCGATCGGCGCCTACCAGGGCGGCACCGATCCGACGGTCGACGCCGCGATCGCGCTGCGCCCTCAGCTCGACCGCTT
CCTCAAGCAGCGCCCGGACGAGAAGTCGTCGGCCGCGGAGGCCGACGAGCTGCTGCTCGACATCGCCGCGCGCATCGGCG
AGTACGCCGGCGTCGGTCCCGAGCCGGCCCCCGCCGACCCGGCCGAGCAGCCCGCCTCCGCTCCCGGCGGCTCCGCCGCC
GCGATACCGCCGCTGCCGAACCTCGCCTGA

Protein sequence :
MSPEDQTPDAVVAEQLGDRLKHVGNVLRASDLARRHGRVSDLIGLVVEATGLQAEVGEICMVNGDRGHPPVPAEVVGFRG
ARTLLMPLGEMHGIGPATTTRATGTPFRIRVGQDLLGRVIDGLGKPIDGMPRATNGHPRSTNASPPDPLDRPRIDQRVDL
GVRALDALVPCGRGQRLGIFAGSGVGKSSLLGMIARSTTADVNVIALVGERGREVKEFVERDLGDALSRSVVVVATSDQP
ALVRIKAAFTATAIAEHFRDQGNDVMLMMDSVTRFAMAQREVGLAIGEPPATRGYTPSVFAQLPRLLERSGTARTGSITG
LYTVLVDGDDMNEPIADAVRSILDGHVVLTRELAHASHYPAIDVLQSVSRLVGEIVSPEVRAAGQAVRQLMASYKEKEDL
IAIGAYQGGTDPTVDAAIALRPQLDRFLKQRPDEKSSAAEADELLLDIAARIGEYAGVGPEPAPADPAEQPASAPGGSAA
AIPPLPNLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-89 52
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-89 52
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 9e-84 52
lscN AAO18044.1 LscN Virulence TTSS locus Protein 3e-96 51
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 8e-90 51
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 2e-90 51
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 1e-88 50
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 2e-89 50
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 2e-89 50
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-88 50
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-89 50
unnamed AAL06369.1 EscN Virulence LEE Protein 6e-85 50
escN CAC81862.1 EscN protein Virulence LEE II Protein 9e-86 49
escN YP_003236088.1 translocator EscN Virulence LEE Protein 5e-85 49
escN AAC38383.1 EscN Virulence LEE Protein 4e-85 49
escN NP_290268.1 hypothetical protein Virulence LEE Protein 3e-85 49
escN AAC31513.1 L0034 Virulence LEE Protein 2e-85 49
ECs4568 NP_312595.1 EscN Virulence LEE Protein 3e-85 49
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 2e-85 49
escN YP_003223475.1 translocator EscN Virulence LEE Protein 1e-85 49
escN CAI43874.1 EscN protein Virulence LEE Protein 1e-85 49
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 1e-85 49
escN AAK26715.1 EscN Virulence LEE Protein 9e-86 49
escN AAL57542.1 EscN Virulence LEE Protein 9e-86 49
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 2e-86 48
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 2e-86 48
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 2e-74 48
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 2e-74 48
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 5e-71 47
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-79 47
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-79 47
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 1e-79 47
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 2e-79 47
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-79 47
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 1e-72 47
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 1e-71 46
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 9e-69 46
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 9e-69 46
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 2e-81 46
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 8e-78 46
invC AAS66861.1 InvC Not tested SSR-2 Protein 2e-69 44
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 5e-74 44
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 2e-74 44
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 5e-75 44
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 4e-68 43
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 4e-68 43
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 4e-68 43
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 4e-68 43
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 2e-66 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cwoe_0041 YP_003391852.1 flagellar protein export ATPase FliI VFG2144 Protein 4e-99 53
Cwoe_0041 YP_003391852.1 flagellar protein export ATPase FliI VFG0192 Protein 1e-96 52
Cwoe_0041 YP_003391852.1 flagellar protein export ATPase FliI VFG0390 Protein 1e-95 52
Cwoe_0041 YP_003391852.1 flagellar protein export ATPase FliI VFG0048 Protein 1e-97 51
Cwoe_0041 YP_003391852.1 flagellar protein export ATPase FliI VFG2331 Protein 8e-93 50
Cwoe_0041 YP_003391852.1 flagellar protein export ATPase FliI VFG1254 Protein 9e-91 50
Cwoe_0041 YP_003391852.1 flagellar protein export ATPase FliI VFG2499 Protein 4e-87 50
Cwoe_0041 YP_003391852.1 flagellar protein export ATPase FliI VFG0812 Protein 1e-85 49
Cwoe_0041 YP_003391852.1 flagellar protein export ATPase FliI VFG0730 Protein 3e-85 49
Cwoe_0041 YP_003391852.1 flagellar protein export ATPase FliI VFG0515 Protein 9e-80 47
Cwoe_0041 YP_003391852.1 flagellar protein export ATPase FliI VFG2459 Protein 2e-75 45
Cwoe_0041 YP_003391852.1 flagellar protein export ATPase FliI VFG0555 Protein 2e-68 43
Cwoe_0041 YP_003391852.1 flagellar protein export ATPase FliI VFG1778 Protein 2e-69 43
Cwoe_0041 YP_003391852.1 flagellar protein export ATPase FliI VFG1008 Protein 2e-69 41